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CAZyme Information: MGYG000000562_01232

You are here: Home > Sequence: MGYG000000562_01232

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lachnospira sp000437735
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira sp000437735
CAZyme ID MGYG000000562_01232
CAZy Family CE8
CAZyme Description Pectinesterase A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
312 MGYG000000562_4|CGC3 35387.61 5.2425
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000562 2986625 MAG China Asia
Gene Location Start: 220334;  End: 221272  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000562_01232.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 2 310 8.4e-91 0.9861111111111112

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 6.98e-71 1 310 83 402
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam01095 Pectinesterase 5.70e-63 2 305 2 290
Pectinesterase.
PLN02773 PLN02773 1.66e-54 1 304 6 290
pectinesterase
PLN02682 PLN02682 1.25e-51 2 301 71 352
pectinesterase family protein
PLN02432 PLN02432 1.07e-50 1 301 12 277
putative pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACR72174.1 1.57e-157 1 309 1 310
SET76962.1 6.41e-111 1 309 1 312
QRP39805.1 1.31e-110 2 311 18 342
ASN95501.1 1.31e-110 2 311 18 342
ADZ82949.1 8.78e-109 4 309 3 311

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1GQ8_A 3.42e-33 2 283 9 272
Pectinmethylesterase from Carrot [Daucus carota]
2NSP_A 1.45e-32 4 311 7 335
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
3UW0_A 2.16e-30 11 238 43 269
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
1XG2_A 6.80e-30 4 298 7 285
ChainA, Pectinesterase 1 [Solanum lycopersicum]
1QJV_A 1.42e-26 4 311 7 335
ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9LVQ0 2.08e-42 1 304 6 290
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
O49298 7.51e-40 2 305 251 532
Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana OX=3702 GN=PME6 PE=2 SV=1
Q43043 1.21e-38 3 289 60 329
Pectinesterase OS=Petunia integrifolia OX=4103 GN=PPE1 PE=2 SV=1
Q8L7Q7 4.22e-38 2 305 289 587
Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana OX=3702 GN=PME64 PE=2 SV=2
Q84R10 8.96e-38 4 305 208 497
Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana OX=3702 GN=PME36 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999316 0.000705 0.000014 0.000001 0.000001 0.000002

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000562_01232.