You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000000580_00389
You are here: Home > Sequence: MGYG000000580_00389
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Streptococcus vestibularis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus vestibularis | |||||||||||
| CAZyme ID | MGYG000000580_00389 | |||||||||||
| CAZy Family | GT0 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 43714; End: 45357 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam05045 | RgpF | 1.96e-95 | 34 | 412 | 1 | 407 | Rhamnan synthesis protein F. This family consists of a group of proteins which are related to the Streptococcus rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O polysaccharides of phytopathogenic bacteria and are regarded as pathogenic factors. |
| COG3754 | RgpF | 1.99e-86 | 1 | 497 | 1 | 529 | Lipopolysaccharide biosynthesis protein [Cell wall/membrane/envelope biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QEW09567.1 | 1.03e-113 | 1 | 428 | 1 | 432 |
| VED88876.1 | 5.75e-113 | 1 | 496 | 1 | 519 |
| QBS00320.1 | 8.98e-112 | 1 | 428 | 1 | 432 |
| VEE19593.1 | 8.98e-112 | 1 | 428 | 1 | 432 |
| QBS00422.1 | 8.98e-112 | 1 | 428 | 1 | 432 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P55470 | 1.63e-11 | 23 | 190 | 99 | 264 | Uncharacterized protein y4gN OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a03500 PE=4 SV=1 |
| F7YJG6 | 7.56e-08 | 56 | 207 | 81 | 225 | Virulence protein VirA OS=Vibrio anguillarum (strain ATCC 68554 / 775) OX=882102 GN=virA PE=4 SV=2 |
| P0DJH1 | 7.56e-08 | 56 | 207 | 81 | 225 | Virulence protein VirA OS=Vibrio anguillarum OX=55601 GN=virA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000051 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |