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CAZyme Information: MGYG000000715_01249

You are here: Home > Sequence: MGYG000000715_01249

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-110 sp900544705
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; CAG-110; CAG-110 sp900544705
CAZyme ID MGYG000000715_01249
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1518 MGYG000000715_9|CGC1 163047.25 6.0869
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000715 2198914 MAG Kazakhstan Asia
Gene Location Start: 83302;  End: 87858  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000715_01249.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH25 1310 1494 3.1e-37 0.9943502824858758
CBM13 1148 1285 1.7e-26 0.6968085106382979

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd06414 GH25_LytC-like 1.38e-51 1309 1503 3 191
The LytC lysozyme of Streptococcus pneumoniae is a bacterial cell wall hydrolase that cleaves the beta1-4-glycosydic bond located between the N-acetylmuramoyl-N-glucosaminyl residues of the cell wall polysaccharide chains. LytC is composed of a C-terminal glycosyl hydrolase family 25 (GH25) domain and an N-terminal choline-binding module (CBM) consisting of eleven homologous repeats that specifically recognizes the choline residues of pneumococcal lipoteichoic and teichoic acids. This domain arrangement is the reverse of the major pneumococcal autolysin, LytA, and the CPL-1-like lytic enzymes of the pneumococcal bacteriophages, in which the CBM (consisting of six repeats) is at the C-terminus. This model represents the C-terminal catalytic domain of the LytC-like enzymes.
pfam14200 RicinB_lectin_2 2.76e-25 1182 1268 1 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 1.24e-22 830 918 2 89
Ricin-type beta-trefoil lectin domain-like.
pfam01183 Glyco_hydro_25 3.92e-20 1310 1494 1 180
Glycosyl hydrolases family 25.
pfam14200 RicinB_lectin_2 1.01e-19 468 556 2 89
Ricin-type beta-trefoil lectin domain-like.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QPS13527.1 8.51e-123 319 1130 525 1218
QMW73215.1 8.51e-123 319 1130 525 1218
QQV05342.1 1.05e-121 312 1189 540 1330
QQY27665.1 1.17e-94 313 1504 537 1711
QIP49137.1 6.01e-49 309 1121 371 1084

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000390 0.998795 0.000291 0.000204 0.000162 0.000135

TMHMM  Annotations      download full data without filtering help

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