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CAZyme Information: MGYG000000792_00108

You are here: Home > Sequence: MGYG000000792_00108

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eubacterium_M sp900540015
Lineage Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Anaerovoracaceae; Eubacterium_M; Eubacterium_M sp900540015
CAZyme ID MGYG000000792_00108
CAZy Family GT4
CAZyme Description Ubiquinone biosynthesis O-methyltransferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1641 MGYG000000792_1|CGC1 191542.9 5.6988
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000792 1373170 MAG China Asia
Gene Location Start: 120133;  End: 125058  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000792_00108.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd03801 GT4_PimA-like 1.74e-21 1291 1631 31 366
phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.
COG1196 Smc 2.43e-18 236 477 667 904
Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning].
TIGR02168 SMC_prok_B 1.19e-17 212 506 236 517
chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
COG1196 Smc 3.78e-16 224 491 234 515
Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning].
TIGR02168 SMC_prok_B 3.03e-15 238 520 195 499
chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AIY81850.1 0.0 573 1630 32 1099
SDS87966.1 1.21e-281 7 1629 25 1608
AZN37304.1 3.32e-273 7 1630 25 1888
ALS25943.1 8.86e-273 595 1633 50 1100
QXH87868.1 3.47e-269 7 1630 21 1822

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3MGG_A 2.50e-06 38 138 38 140
CrystalStructure of Methyl Transferase from Methanosarcina mazei [Methanosarcina mazei],3MGG_B Crystal Structure of Methyl Transferase from Methanosarcina mazei [Methanosarcina mazei]
6GKV_A 2.88e-06 38 138 124 225
Crystalstructure of Coclaurine N-Methyltransferase (CNMT) bound to N-methylheliamine and SAH [Coptis japonica],6GKV_B Crystal structure of Coclaurine N-Methyltransferase (CNMT) bound to N-methylheliamine and SAH [Coptis japonica],6GKY_A Crystal structure of Coclaurine N-Methyltransferase (CNMT) bound to N-methylheliamine and SAH [Coptis japonica],6GKY_B Crystal structure of Coclaurine N-Methyltransferase (CNMT) bound to N-methylheliamine and SAH [Coptis japonica]
6GKZ_A 6.68e-06 38 138 124 225
Crystalstructure of Coclaurine N-Methyltransferase (CNMT) bound to N-methylheliamine and SAH [Coptis japonica],6GKZ_B Crystal structure of Coclaurine N-Methyltransferase (CNMT) bound to N-methylheliamine and SAH [Coptis japonica],6GKZ_C Crystal structure of Coclaurine N-Methyltransferase (CNMT) bound to N-methylheliamine and SAH [Coptis japonica],6GKZ_D Crystal structure of Coclaurine N-Methyltransferase (CNMT) bound to N-methylheliamine and SAH [Coptis japonica]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O31681 3.73e-07 630 932 42 341
Spore protein YkvP OS=Bacillus subtilis (strain 168) OX=224308 GN=ykvP PE=2 SV=1
A8HVC4 2.60e-06 38 139 65 165
Ubiquinone biosynthesis O-methyltransferase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571) OX=438753 GN=ubiG PE=3 SV=1
Q108P1 5.26e-06 38 174 129 256
(S)-tetrahydroprotoberberine N-methyltransferase OS=Papaver somniferum OX=3469 PE=1 SV=1
Q5C9L6 5.33e-06 38 138 132 233
(S)-coclaurine N-methyltransferase OS=Thalictrum flavum subsp. glaucum OX=150095 PE=1 SV=1
Q9PAM5 5.82e-06 28 139 44 157
Ubiquinone biosynthesis O-methyltransferase OS=Xylella fastidiosa (strain 9a5c) OX=160492 GN=ubiG PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000052 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000792_00108.