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CAZyme Information: MGYG000000956_01810

You are here: Home > Sequence: MGYG000000956_01810

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Barnesiella sp900538705
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Barnesiellaceae; Barnesiella; Barnesiella sp900538705
CAZyme ID MGYG000000956_01810
CAZy Family CE12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
551 62283.57 8.2015
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000956 2507716 MAG Denmark Europe
Gene Location Start: 96864;  End: 98519  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000956_01810.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 249 532 6e-99 0.9861111111111112
CE12 26 234 6e-81 0.9952380952380953

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd01821 Rhamnogalacturan_acetylesterase_like 1.29e-87 26 234 2 198
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
pfam01095 Pectinesterase 3.08e-84 249 536 1 298
Pectinesterase.
PLN02682 PLN02682 2.98e-68 248 523 69 349
pectinesterase family protein
PLN02773 PLN02773 8.72e-67 252 534 9 292
pectinesterase
COG4677 PemB 1.01e-63 248 536 81 405
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRP57044.1 3.18e-236 9 540 11 566
QQT77712.1 3.18e-236 9 540 11 566
QUU07655.1 9.06e-236 9 540 11 566
ABR39491.1 1.17e-232 22 540 20 560
QQY38317.1 1.17e-232 22 540 20 560

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1XG2_A 1.44e-42 251 535 6 300
ChainA, Pectinesterase 1 [Solanum lycopersicum]
1GQ8_A 1.51e-42 249 534 8 297
Pectinmethylesterase from Carrot [Daucus carota]
5C1E_A 5.05e-31 281 510 38 266
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 5.05e-31 281 510 38 266
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
3UW0_A 1.58e-29 248 486 31 303
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9FM79 6.94e-53 250 539 82 377
Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1
Q9LVQ0 2.68e-52 252 523 9 284
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q43062 2.16e-51 249 536 208 506
Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica OX=3760 PE=2 SV=1
Q84R10 1.36e-48 249 539 205 507
Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana OX=3702 GN=PME36 PE=2 SV=2
O49298 3.43e-48 249 536 250 540
Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana OX=3702 GN=PME6 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000884 0.237755 0.761066 0.000083 0.000100 0.000097

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000956_01810.