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CAZyme Information: MGYG000000959_00293
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ruminococcus sp900752785 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus; Ruminococcus sp900752785 | |||||||||||
| CAZyme ID | MGYG000000959_00293 | |||||||||||
| CAZy Family | cohesin | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 78; End: 4136 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| cohesin | 740 | 863 | 7e-18 | 0.9626865671641791 |
| cohesin | 258 | 380 | 4.4e-16 | 0.9850746268656716 |
| cohesin | 534 | 658 | 7.5e-16 | 0.9776119402985075 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd14257 | CttA_X | 5.66e-19 | 1130 | 1239 | 9 | 116 | X module of the carbohydrate-binding protein CttA and similar proteins. This model represents a putative carbohydrate-binding domain conserved in Ruminococcus, which sits N-terminal to a dockerin repeat; the protein may be a component of the Ruminococcus cellulosome system. This X module does not share similarities with other known X modules from cellulolytic bacteria and may have a structural role. |
| pfam00963 | Cohesin | 2.04e-13 | 740 | 871 | 3 | 139 | Cohesin domain. Cohesin domains interact with a complementary domain, termed the dockerin domain. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. |
| pfam00963 | Cohesin | 3.20e-11 | 258 | 387 | 1 | 139 | Cohesin domain. Cohesin domains interact with a complementary domain, termed the dockerin domain. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. |
| pfam00963 | Cohesin | 5.29e-11 | 534 | 666 | 1 | 139 | Cohesin domain. Cohesin domains interact with a complementary domain, termed the dockerin domain. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. |
| pfam00963 | Cohesin | 6.00e-11 | 393 | 525 | 1 | 139 | Cohesin domain. Cohesin domains interact with a complementary domain, termed the dockerin domain. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5N5P_A | 1.42e-53 | 253 | 388 | 2 | 136 | Crystalstructure of Ruminococcus flavefaciens' type III complex containing the fifth cohesin from scaffoldin B and the dockerin from scaffoldin A [Ruminococcus flavefaciens FD-1],5N5P_C Crystal structure of Ruminococcus flavefaciens' type III complex containing the fifth cohesin from scaffoldin B and the dockerin from scaffoldin A [Ruminococcus flavefaciens FD-1] |
| 4IU3_B | 1.85e-32 | 1131 | 1345 | 15 | 236 | Cohesin-dockerin-X domain complex from Ruminococcus flavefacience [Ruminococcus flavefaciens] |
| 4WKZ_A | 1.85e-32 | 1131 | 1348 | 15 | 239 | Complexof autonomous ScaG cohesin CohG and X-doc domains [Ruminococcus flavefaciens FD-1] |
| 4IU2_B | 3.43e-32 | 1131 | 1345 | 15 | 236 | Cohesin-dockerin-X domain complex from Ruminococcus flavefacience [Ruminococcus flavefaciens] |
| 5M2S_A | 6.60e-09 | 49 | 209 | 3 | 142 | R.flavefaciens' third ScaB cohesin in complex with a group 1 dockerin [Ruminococcus flavefaciens] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000031 | 0.000033 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |