Species | UMGS1518 sp900552575 | |||||||||||
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Lineage | Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; UMGS1518; UMGS1518 sp900552575 | |||||||||||
CAZyme ID | MGYG000000971_01239 | |||||||||||
CAZy Family | GT9 | |||||||||||
CAZyme Description | Lipopolysaccharide heptosyltransferase 1 | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 5929; End: 6990 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GT9 | 74 | 324 | 5.8e-57 | 0.9688888888888889 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG0859 | RfaF | 2.78e-58 | 1 | 323 | 2 | 312 | ADP-heptose:LPS heptosyltransferase [Cell wall/membrane/envelope biogenesis]. |
cd03789 | GT9_LPS_heptosyltransferase | 1.26e-53 | 2 | 334 | 1 | 268 | lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
TIGR02193 | heptsyl_trn_I | 1.02e-52 | 2 | 300 | 1 | 292 | lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
pfam01075 | Glyco_transf_9 | 2.43e-35 | 74 | 321 | 2 | 242 | Glycosyltransferase family 9 (heptosyltransferase). Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core. |
PRK10422 | PRK10422 | 6.64e-19 | 2 | 353 | 7 | 336 | lipopolysaccharide core biosynthesis protein; Provisional |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
AVM43682.1 | 1.39e-98 | 2 | 344 | 83 | 419 |
QSH41947.1 | 1.24e-89 | 2 | 341 | 11 | 349 |
QDV92152.1 | 5.43e-56 | 2 | 322 | 11 | 333 |
BBG62450.1 | 1.51e-51 | 2 | 320 | 5 | 319 |
QNP77240.1 | 4.20e-51 | 2 | 320 | 5 | 319 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
2GT1_A | 4.28e-18 | 1 | 309 | 1 | 300 | E.coli heptosyltransferase WaaC. [Escherichia coli UTI89],2GT1_B E. coli heptosyltransferase WaaC. [Escherichia coli UTI89] |
6DFE_A | 4.28e-18 | 1 | 309 | 1 | 300 | Thestructure of a ternary complex of E. coli WaaC [Escherichia coli],6DFE_B The structure of a ternary complex of E. coli WaaC [Escherichia coli] |
2H1F_A | 4.67e-18 | 1 | 309 | 1 | 300 | E.coli heptosyltransferase WaaC with ADP [Escherichia coli O6],2H1F_B E. coli heptosyltransferase WaaC with ADP [Escherichia coli O6],2H1H_A E. coli heptosyltransferase WaaC with ADP-2-deoxy-2-fluoro heptose [Escherichia coli RS218],2H1H_B E. coli heptosyltransferase WaaC with ADP-2-deoxy-2-fluoro heptose [Escherichia coli RS218] |
3TOV_A | 9.25e-13 | 2 | 299 | 10 | 298 | Thecrystal structure of the glycosyl transferase family 9 from Veillonella parvula DSM 2008 [Veillonella parvula DSM 2008],3TOV_B The crystal structure of the glycosyl transferase family 9 from Veillonella parvula DSM 2008 [Veillonella parvula DSM 2008] |
1PSW_A | 4.46e-09 | 2 | 298 | 2 | 297 | Structureof E. coli ADP-heptose lps heptosyltransferase II [Escherichia coli] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P25742 | 9.48e-19 | 12 | 352 | 5 | 335 | Lipopolysaccharide core heptosyltransferase RfaQ OS=Escherichia coli (strain K12) OX=83333 GN=rfaQ PE=3 SV=2 |
P26469 | 4.47e-18 | 1 | 300 | 1 | 291 | Lipopolysaccharide heptosyltransferase 1 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=rfaC PE=3 SV=2 |
P24173 | 2.16e-17 | 1 | 309 | 1 | 300 | Lipopolysaccharide heptosyltransferase 1 OS=Escherichia coli (strain K12) OX=83333 GN=rfaC PE=1 SV=1 |
P45042 | 2.89e-17 | 1 | 301 | 1 | 300 | ADP-heptose--LPS heptosyltransferase 2 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=rfaF PE=3 SV=1 |
Q9R9D5 | 1.71e-16 | 12 | 301 | 5 | 289 | Lipopolysaccharide core heptosyltransferase RfaQ OS=Escherichia coli OX=562 GN=rfaQ PE=1 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000033 | 0.000016 | 0.000002 | 0.000000 | 0.000000 | 0.000000 |
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