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CAZyme Information: MGYG000001012_01152

You are here: Home > Sequence: MGYG000001012_01152

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Porphyromonas sp900539155
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas; Porphyromonas sp900539155
CAZyme ID MGYG000001012_01152
CAZy Family CBM50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
507 MGYG000001012_26|CGC1 57350.29 8.1636
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001012 2045709 MAG Bangladesh Asia
Gene Location Start: 17693;  End: 19216  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001012_01152.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00118 LysM 3.31e-13 93 136 2 45
Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
COG1388 LysM 2.14e-12 41 136 1 110
LysM repeat [Cell wall/membrane/envelope biogenesis].
smart00257 LysM 5.05e-11 93 136 1 44
Lysin motif.
pfam13458 Peripla_BP_6 2.02e-09 156 481 1 328
Periplasmic binding protein. This family includes a diverse range of periplasmic binding proteins.
pfam01476 LysM 3.11e-09 94 136 1 42
LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AEE13417.1 9.01e-306 1 507 1 507
ATR90566.1 5.51e-76 30 492 37 487
AUR45795.1 1.52e-75 30 492 37 487
AKV65186.1 1.52e-75 30 492 37 487
QUI89469.1 2.14e-75 30 492 37 487

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001427 0.997681 0.000308 0.000187 0.000184 0.000184

TMHMM  Annotations      download full data without filtering help

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7 26