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CAZyme Information: MGYG000001018_00303
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Mediterraneibacter sp900751785 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Mediterraneibacter; Mediterraneibacter sp900751785 | |||||||||||
| CAZyme ID | MGYG000001018_00303 | |||||||||||
| CAZy Family | GH2 | |||||||||||
| CAZyme Description | Beta-galactosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 10323; End: 15062 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH2 | 33 | 600 | 5.2e-107 | 0.6196808510638298 |
| CBM51 | 1128 | 1271 | 1.3e-31 | 0.9850746268656716 |
| CBM32 | 847 | 962 | 2.5e-24 | 0.9112903225806451 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3250 | LacZ | 7.59e-63 | 33 | 572 | 3 | 504 | Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]. |
| PRK10340 | ebgA | 1.60e-46 | 97 | 466 | 111 | 477 | cryptic beta-D-galactosidase subunit alpha; Reviewed |
| PRK10150 | PRK10150 | 1.95e-43 | 93 | 461 | 63 | 438 | beta-D-glucuronidase; Provisional |
| PRK09525 | lacZ | 6.33e-35 | 96 | 444 | 121 | 462 | beta-galactosidase. |
| pfam08305 | NPCBM | 3.30e-32 | 1128 | 1271 | 4 | 135 | NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.) |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ANN35851.1 | 0.0 | 39 | 1274 | 16 | 1250 |
| AXE81952.1 | 8.22e-318 | 11 | 1078 | 51 | 1183 |
| QIH35625.1 | 4.88e-257 | 34 | 950 | 22 | 958 |
| QUT49244.1 | 1.76e-253 | 39 | 963 | 27 | 969 |
| CUA17213.1 | 1.60e-246 | 41 | 963 | 28 | 968 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4YPJ_A | 4.59e-79 | 40 | 806 | 6 | 807 | ChainA, Beta galactosidase [Niallia circulans],4YPJ_B Chain B, Beta galactosidase [Niallia circulans] |
| 7CWD_A | 8.78e-76 | 44 | 811 | 4 | 806 | ChainA, beta-glalactosidase [Niallia circulans],7CWI_A Chain A, beta-galactosidase [Niallia circulans] |
| 6HPD_A | 1.43e-66 | 39 | 799 | 33 | 797 | Thestructure of a beta-glucuronidase from glycoside hydrolase family 2 [Formosa agariphila KMM 3901] |
| 6QUB_B | 3.95e-66 | 45 | 808 | 11 | 856 | Truncatedbeta-galactosidase III from Bifidobacterium bifidum in complex with galactose [Bifidobacterium bifidum] |
| 5DMY_A | 4.09e-66 | 45 | 808 | 40 | 885 | Beta-galactosidase- construct 33-930 [Bifidobacterium bifidum],5DMY_B Beta-galactosidase - construct 33-930 [Bifidobacterium bifidum],5DMY_C Beta-galactosidase - construct 33-930 [Bifidobacterium bifidum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P77989 | 1.18e-94 | 40 | 799 | 2 | 730 | Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2 |
| A7LXS9 | 7.89e-67 | 39 | 801 | 40 | 843 | Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1 |
| T2KN75 | 7.13e-66 | 39 | 799 | 24 | 788 | Beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22060 PE=1 SV=1 |
| P26257 | 1.69e-62 | 41 | 759 | 2 | 708 | Beta-galactosidase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=lacZ PE=1 SV=1 |
| T2KPJ7 | 1.33e-58 | 34 | 761 | 44 | 781 | Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000339 | 0.998869 | 0.000229 | 0.000210 | 0.000165 | 0.000140 |
