logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001018_02263

You are here: Home > Sequence: MGYG000001018_02263

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Mediterraneibacter sp900751785
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Mediterraneibacter; Mediterraneibacter sp900751785
CAZyme ID MGYG000001018_02263
CAZy Family CBM5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1704 MGYG000001018_152|CGC2 186942.42 4.0487
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001018 2841260 MAG Sweden Europe
Gene Location Start: 25142;  End: 30256  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001018_02263.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01576 Myosin_tail_1 3.51e-04 1410 1545 243 380
Myosin tail. The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
PRK04863 mukB 0.006 1427 1533 551 667
chromosome partition protein MukB.
pfam07554 FIVAR 0.008 1406 1467 4 68
FIVAR domain. This domain is found in a wide variety of contexts, but mostly occurring in cell wall associated proteins. A lack of conserved catalytic residues suggests that it is a binding domain. From context, possible substrates are hyaluronate or fibronectin (personal obs: C Yeats). This is further evidenced by. Possibly the exact substrate is N-acetyl glucosamine. Finding it in the same protein as pfam05089 further supports this proposal. It is found in the C-terminal part of Bacillus sp. Gellan lyase, which is removed during maturation. Some of the proteins it is found in are involved in methicillin resistance. The name FIVAR derives from Found In Various Architectures.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AOZ47007.1 0.0 3 1158 5 1136
AZP36897.1 0.0 3 1158 5 1136
AFV90938.1 0.0 3 1158 5 1136
AMS05537.1 0.0 3 1158 5 1136
ALN14952.1 0.0 3 1158 5 1136

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000591 0.997929 0.000435 0.000608 0.000223 0.000184

TMHMM  Annotations      download full data without filtering help

start end
7 29
1676 1698