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CAZyme Information: MGYG000001039_00385

You are here: Home > Sequence: MGYG000001039_00385

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp900553185
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp900553185
CAZyme ID MGYG000001039_00385
CAZy Family GH2
CAZyme Description Beta-galactosidase BoGH2A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
837 94787.97 6.2837
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001039 3066315 MAG Denmark Europe
Gene Location Start: 125947;  End: 128460  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 26 703 2.7e-122 0.6702127659574468

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 2.05e-66 25 640 10 622
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 7.01e-47 34 483 19 453
beta-D-glucuronidase; Provisional
pfam18565 Glyco_hydro2_C5 7.83e-47 730 832 1 103
Glycoside hydrolase family 2 C-terminal domain 5. Domain 5 is found in dimeric beta-D-galactosidase from Paracoccus sp. 32d, which contributes to stabilization of the functional dimer. It is suggested that the location of this domain 5, may be one of the factors responsible for the creation of a functional dimer and cold-adaptation of this enzyme.
PRK10340 ebgA 1.26e-39 28 467 42 472
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 7.51e-27 52 467 80 485
beta-galactosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRO26514.1 0.0 21 837 11 825
QRM70638.1 0.0 2 836 1 833
QCQ32540.1 0.0 2 836 1 833
QCQ51284.1 0.0 2 836 1 833
QTO24391.1 0.0 2 836 1 833

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5T98_A 1.82e-234 32 829 32 814
Crystalstructure of BuGH2Awt [Bacteroides uniformis],5T98_B Crystal structure of BuGH2Awt [Bacteroides uniformis],5T99_A Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis],5T99_B Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis]
7CWD_A 6.84e-192 33 833 9 799
ChainA, beta-glalactosidase [Niallia circulans],7CWI_A Chain A, beta-galactosidase [Niallia circulans]
4YPJ_A 1.84e-190 32 826 14 798
ChainA, Beta galactosidase [Niallia circulans],4YPJ_B Chain B, Beta galactosidase [Niallia circulans]
5DMY_A 9.06e-148 31 833 42 880
Beta-galactosidase- construct 33-930 [Bifidobacterium bifidum],5DMY_B Beta-galactosidase - construct 33-930 [Bifidobacterium bifidum],5DMY_C Beta-galactosidase - construct 33-930 [Bifidobacterium bifidum]
6QUB_B 1.10e-146 31 833 13 851
Truncatedbeta-galactosidase III from Bifidobacterium bifidum in complex with galactose [Bifidobacterium bifidum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7LXS9 2.08e-206 34 837 51 850
Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1
T2KM09 3.44e-109 25 814 46 799
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2
T2KPJ7 3.63e-54 25 791 51 786
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1
P77989 1.07e-52 62 821 11 723
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
P26257 8.70e-32 106 774 58 700
Beta-galactosidase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=lacZ PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000669 0.998463 0.000355 0.000171 0.000163 0.000160

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001039_00385.