Species | CAG-484 sp000431315 | |||||||||||
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Lineage | Bacteria; Cyanobacteria; Vampirovibrionia; Gastranaerophilales; Gastranaerophilaceae; CAG-484; CAG-484 sp000431315 | |||||||||||
CAZyme ID | MGYG000001055_00877 | |||||||||||
CAZy Family | GH23 | |||||||||||
CAZyme Description | Membrane-bound lytic murein transglycosylase F | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 35988; End: 36722 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH23 | 140 | 243 | 2.5e-36 | 0.7703703703703704 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
cd00254 | LT-like | 8.53e-54 | 139 | 243 | 1 | 110 | lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
cd13401 | Slt70-like | 1.23e-50 | 128 | 243 | 10 | 146 | 70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda. |
cd16896 | LT_Slt70-like | 4.67e-45 | 128 | 243 | 8 | 144 | uncharacterized lytic transglycosylase subfamily with similarity to Slt70. Uncharacterized lytic transglycosylase (LT) with a conserved sequence pattern suggesting similarity to the Slt70, a 70kda soluble lytic transglycosylase which also has an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
pfam01464 | SLT | 4.02e-38 | 132 | 223 | 5 | 102 | Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems. |
cd13403 | MLTF-like | 5.98e-38 | 130 | 243 | 3 | 156 | membrane-bound lytic murein transglycosylase F (MLTF) and similar proteins. This subfamily includes membrane-bound lytic murein transglycosylase F (MltF, murein lyase F) that degrades murein glycan strands. It is responsible for catalyzing the release of 1,6-anhydromuropeptides from peptidoglycan. Lytic transglycosylase catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc) as do goose-type lysozymes. However, in addition, it also makes a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
AOR38062.1 | 9.47e-105 | 1 | 244 | 1 | 238 |
QNF30947.1 | 1.97e-54 | 127 | 243 | 31 | 147 |
QHZ46261.1 | 9.39e-54 | 115 | 243 | 72 | 208 |
ATH95075.1 | 5.26e-53 | 107 | 243 | 78 | 219 |
SCA85093.1 | 2.11e-52 | 107 | 243 | 78 | 219 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
6FBT_A | 1.43e-16 | 130 | 241 | 455 | 587 | ChainA, Lytic murein transglycosylase [Pseudomonas aeruginosa] |
5OHU_A | 1.46e-16 | 130 | 241 | 484 | 616 | TheX-ray Structure of Lytic Transglycosylase Slt from Pseudomonas aeruginosa [Pseudomonas aeruginosa] |
5MPQ_A | 1.89e-16 | 128 | 242 | 420 | 551 | BulgecinA: The key to a broad-spectrum inhibitor that targets lytic transglycosylases [Neisseria meningitidis] |
5O1J_A | 1.89e-16 | 128 | 242 | 424 | 555 | Lytictransglycosylase in action [Neisseria meningitidis MC58] |
6FPN_B | 1.90e-16 | 128 | 242 | 430 | 561 | Lytictransglycosylase in action [Neisseria meningitidis MC58] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
O31608 | 1.41e-52 | 128 | 243 | 64 | 179 | Putative murein lytic transglycosylase YjbJ OS=Bacillus subtilis (strain 168) OX=224308 GN=yjbJ PE=3 SV=1 |
O64046 | 7.43e-45 | 103 | 243 | 1401 | 1541 | Probable tape measure protein OS=Bacillus phage SPbeta OX=66797 GN=yomI PE=3 SV=1 |
O31976 | 7.43e-45 | 103 | 243 | 1401 | 1541 | SPbeta prophage-derived uncharacterized transglycosylase YomI OS=Bacillus subtilis (strain 168) OX=224308 GN=yomI PE=3 SV=2 |
P27380 | 4.68e-20 | 128 | 216 | 11 | 98 | Transglycosylase OS=Enterobacteria phage PRD1 OX=10658 GN=VII PE=1 SV=3 |
P39434 | 1.46e-15 | 127 | 241 | 483 | 620 | Soluble lytic murein transglycosylase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=slt PE=3 SV=2 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000042 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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