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CAZyme Information: MGYG000001091_01366
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Citrobacter_A sp009363175 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter_A; Citrobacter_A sp009363175 | |||||||||||
| CAZyme ID | MGYG000001091_01366 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3984; End: 4430 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH23 | 25 | 141 | 2e-24 | 0.8518518518518519 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK15328 | PRK15328 | 7.31e-86 | 1 | 141 | 1 | 143 | type III secretion system invasion protein IagB. |
| cd13400 | LT_IagB-like | 3.17e-53 | 27 | 139 | 1 | 109 | Escherichia coli invasion protein IagB and similar proteins. Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda. |
| pfam01464 | SLT | 6.55e-28 | 20 | 118 | 1 | 96 | Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems. |
| PRK13722 | PRK13722 | 2.22e-25 | 4 | 141 | 6 | 146 | lytic transglycosylase; Provisional |
| cd00254 | LT-like | 2.12e-17 | 31 | 138 | 1 | 111 | lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AKE58388.1 | 1.47e-95 | 1 | 148 | 1 | 148 |
| AEN64116.1 | 1.11e-90 | 1 | 142 | 1 | 142 |
| QUC28639.1 | 1.73e-89 | 1 | 143 | 1 | 144 |
| QPK01938.1 | 3.73e-89 | 1 | 148 | 1 | 148 |
| BBS36507.1 | 3.73e-89 | 1 | 148 | 1 | 148 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4XP8_A | 1.20e-09 | 18 | 102 | 2 | 87 | Structureof EtgA D60N mutant [Escherichia coli] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| E1WAC2 | 5.28e-46 | 4 | 147 | 6 | 149 | Invasion protein IagB OS=Salmonella typhimurium (strain SL1344) OX=216597 GN=iagB PE=3 SV=1 |
| P0CL15 | 5.28e-46 | 4 | 147 | 6 | 149 | Invasion protein IagB OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=iagB PE=3 SV=1 |
| P43018 | 1.51e-45 | 4 | 147 | 6 | 149 | Invasion protein IagB OS=Salmonella typhi OX=90370 GN=iagB PE=3 SV=1 |
| Q07568 | 5.05e-32 | 1 | 140 | 1 | 141 | Protein IpgF OS=Shigella flexneri OX=623 GN=ipgF PE=3 SV=1 |
| Q55287 | 7.15e-32 | 17 | 140 | 18 | 141 | Protein IpgF OS=Shigella sonnei OX=624 GN=ipgF PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000513 | 0.998379 | 0.000539 | 0.000190 | 0.000175 | 0.000178 |