Species | Chryseobacterium gambrini | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Bacteroidota; Bacteroidia; Flavobacteriales; Weeksellaceae; Chryseobacterium; Chryseobacterium gambrini | |||||||||||
CAZyme ID | MGYG000001095_00582 | |||||||||||
CAZy Family | GH17 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
|
|||||||||||
Genome Property |
|
|||||||||||
Gene Location | Start: 5682; End: 8045 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH17 | 558 | 787 | 9.5e-23 | 0.909967845659164 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG2211 | MelB | 1.02e-60 | 4 | 472 | 1 | 455 | Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism]. |
cd17332 | MFS_MelB_like | 1.38e-60 | 17 | 453 | 1 | 420 | Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily. This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. |
pfam13347 | MFS_2 | 2.00e-60 | 19 | 457 | 1 | 427 | MFS/sugar transport protein. This family is part of the major facilitator superfamily of membrane transport proteins. |
COG5309 | Scw11 | 4.20e-39 | 528 | 782 | 44 | 304 | Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism]. |
TIGR00792 | gph | 1.07e-37 | 17 | 470 | 1 | 437 | sugar (Glycoside-Pentoside-Hexuronide) transporter. The Glycoside-Pentoside-Hexuronide (GPH):Cation Symporter Family (TC 2.A.2) GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
VFB04066.1 | 0.0 | 1 | 787 | 1 | 787 |
QQV02673.1 | 0.0 | 1 | 787 | 1 | 787 |
QBN20578.1 | 0.0 | 14 | 787 | 1 | 769 |
QLG47284.1 | 0.0 | 14 | 787 | 1 | 776 |
QSE96427.1 | 0.0 | 11 | 787 | 7 | 778 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
4WTP_A | 1.03e-30 | 548 | 786 | 51 | 289 | Crystalstructure of glycoside hydrolase family 17 beta-1,3-glucanosyltransferase from Rhizomucor miehei [Rhizomucor miehei CAU432] |
4WTR_A | 6.42e-30 | 548 | 786 | 51 | 289 | Active-sitemutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaribiose [Rhizomucor miehei CAU432],4WTS_A Active-site mutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaritriose [Rhizomucor miehei CAU432] |
4M64_A | 1.73e-10 | 17 | 473 | 8 | 455 | 3Dcrystal structure of Na+/melibiose symporter of Salmonella typhimurium [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4M64_B 3D crystal structure of Na+/melibiose symporter of Salmonella typhimurium [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4M64_C 3D crystal structure of Na+/melibiose symporter of Salmonella typhimurium [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4M64_D 3D crystal structure of Na+/melibiose symporter of Salmonella typhimurium [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] |
7L16_A | 2.12e-09 | 17 | 473 | 7 | 454 | ChainA, Melibiose carrier protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],7L17_A Chain A, Melibiose carrier protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] |
7N98_A | 8.43e-08 | 7 | 468 | 35 | 511 | ChainA, Sodium-dependent lysophosphatidylcholine symporter 1 [Mus musculus] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P94488 | 3.88e-23 | 10 | 470 | 7 | 450 | Uncharacterized symporter YnaJ OS=Bacillus subtilis (strain 168) OX=224308 GN=ynaJ PE=3 SV=2 |
P15703 | 1.93e-18 | 556 | 787 | 50 | 306 | Glucan 1,3-beta-glucosidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BGL2 PE=1 SV=1 |
O34368 | 3.00e-18 | 2 | 472 | 12 | 462 | Probable glucitol transport protein GutA OS=Bacillus subtilis (strain 168) OX=224308 GN=gutA PE=3 SV=1 |
P32136 | 5.46e-18 | 1 | 471 | 1 | 452 | Putative sulfoquinovose importer OS=Escherichia coli (strain K12) OX=83333 GN=yihO PE=3 SV=4 |
P75683 | 1.64e-17 | 17 | 472 | 9 | 445 | Putative glycoside/cation symporter YagG OS=Escherichia coli (strain K12) OX=83333 GN=yagG PE=1 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000012 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
start | end |
---|---|
20 | 42 |
52 | 74 |
87 | 106 |
116 | 138 |
159 | 176 |
191 | 210 |
251 | 273 |
286 | 308 |
321 | 340 |
345 | 364 |
391 | 413 |
428 | 450 |
Copyright 2022 © YIN LAB, UNL. All rights reserved. Designed by Jinfang Zheng and Boyang Hu. Maintained by Yanbin Yin.