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CAZyme Information: MGYG000001095_00582

You are here: Home > Sequence: MGYG000001095_00582

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Chryseobacterium gambrini
Lineage Bacteria; Bacteroidota; Bacteroidia; Flavobacteriales; Weeksellaceae; Chryseobacterium; Chryseobacterium gambrini
CAZyme ID MGYG000001095_00582
CAZy Family GH17
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
787 88819.25 7.0155
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001095 4128611 MAG Sweden Europe
Gene Location Start: 5682;  End: 8045  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001095_00582.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH17 558 787 9.5e-23 0.909967845659164

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG2211 MelB 1.02e-60 4 472 1 455
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism].
cd17332 MFS_MelB_like 1.38e-60 17 453 1 420
Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily. This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.
pfam13347 MFS_2 2.00e-60 19 457 1 427
MFS/sugar transport protein. This family is part of the major facilitator superfamily of membrane transport proteins.
COG5309 Scw11 4.20e-39 528 782 44 304
Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism].
TIGR00792 gph 1.07e-37 17 470 1 437
sugar (Glycoside-Pentoside-Hexuronide) transporter. The Glycoside-Pentoside-Hexuronide (GPH):Cation Symporter Family (TC 2.A.2) GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VFB04066.1 0.0 1 787 1 787
QQV02673.1 0.0 1 787 1 787
QBN20578.1 0.0 14 787 1 769
QLG47284.1 0.0 14 787 1 776
QSE96427.1 0.0 11 787 7 778

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4WTP_A 1.03e-30 548 786 51 289
Crystalstructure of glycoside hydrolase family 17 beta-1,3-glucanosyltransferase from Rhizomucor miehei [Rhizomucor miehei CAU432]
4WTR_A 6.42e-30 548 786 51 289
Active-sitemutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaribiose [Rhizomucor miehei CAU432],4WTS_A Active-site mutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaritriose [Rhizomucor miehei CAU432]
4M64_A 1.73e-10 17 473 8 455
3Dcrystal structure of Na+/melibiose symporter of Salmonella typhimurium [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4M64_B 3D crystal structure of Na+/melibiose symporter of Salmonella typhimurium [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4M64_C 3D crystal structure of Na+/melibiose symporter of Salmonella typhimurium [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],4M64_D 3D crystal structure of Na+/melibiose symporter of Salmonella typhimurium [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
7L16_A 2.12e-09 17 473 7 454
ChainA, Melibiose carrier protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],7L17_A Chain A, Melibiose carrier protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
7N98_A 8.43e-08 7 468 35 511
ChainA, Sodium-dependent lysophosphatidylcholine symporter 1 [Mus musculus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P94488 3.88e-23 10 470 7 450
Uncharacterized symporter YnaJ OS=Bacillus subtilis (strain 168) OX=224308 GN=ynaJ PE=3 SV=2
P15703 1.93e-18 556 787 50 306
Glucan 1,3-beta-glucosidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BGL2 PE=1 SV=1
O34368 3.00e-18 2 472 12 462
Probable glucitol transport protein GutA OS=Bacillus subtilis (strain 168) OX=224308 GN=gutA PE=3 SV=1
P32136 5.46e-18 1 471 1 452
Putative sulfoquinovose importer OS=Escherichia coli (strain K12) OX=83333 GN=yihO PE=3 SV=4
P75683 1.64e-17 17 472 9 445
Putative glycoside/cation symporter YagG OS=Escherichia coli (strain K12) OX=83333 GN=yagG PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000012 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
20 42
52 74
87 106
116 138
159 176
191 210
251 273
286 308
321 340
345 364
391 413
428 450