logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001100_01272

You are here: Home > Sequence: MGYG000001100_01272

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Weissella viridescens
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Weissella; Weissella viridescens
CAZyme ID MGYG000001100_01272
CAZy Family GT2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
193 21545.3 7.794
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001100 1591687 MAG China Asia
Gene Location Start: 43;  End: 624  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001100_01272.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam04138 GtrA 2.00e-09 67 188 1 117
GtrA-like protein. Members of this family are predicted to be integral membrane proteins with three or four transmembrane spans. They are involved in the synthesis of cell surface polysaccharides. The GtrA family are a subset of this family. GtrA is predicted to be an integral membrane protein with 4 transmembrane spans. It is involved is in O antigen modification by Shigella flexneri bacteriophage X (SfX), but does not determine the specificity of glucosylation. Its function remains unknown, but it may play a role in translocation of undecaprenyl phosphate linked glucose (UndP-Glc) across the cytoplasmic membrane. Another member of this family is a DTDP-glucose-4-keto-6-deoxy-D-glucose reductase, which catalyzes the conversion of dTDP-4-keto-6-deoxy-D-glucose to dTDP-D-fucose, which is involved in the biosynthesis of the serotype-specific polysaccharide antigen of Actinobacillus actinomycetemcomitans Y4 (serotype b). This family also includes the teichoic acid glycosylation protein, GtcA, which is a serotype-specific protein in some Listeria innocua and monocytogenes strains. Its exact function is not known, but it is essential for decoration of cell wall teichoic acids with glucose and galactose.
COG2246 GtrA 0.003 59 189 7 136
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose) [Lipid transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QOD86386.1 9.68e-125 1 193 162 354
AIM62897.1 3.70e-58 1 192 162 353
AIM64295.1 3.70e-58 1 192 162 353
QVV90712.1 3.70e-58 1 192 162 353
AIG65582.1 3.70e-58 1 192 162 353

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999920 0.000066 0.000017 0.000001 0.000000 0.000016

TMHMM  Annotations      download full data without filtering help

start end
68 90
94 116
129 151
161 180