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CAZyme Information: MGYG000001108_00052

You are here: Home > Sequence: MGYG000001108_00052

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900756765
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900756765
CAZyme ID MGYG000001108_00052
CAZy Family GH140
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
472 MGYG000001108_1|CGC1 53170.13 5.812
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001108 1919497 MAG China Asia
Gene Location Start: 67304;  End: 68722  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001108_00052.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH140 52 431 7.2e-87 0.8810679611650486

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13204 DUF4038 4.04e-82 54 374 10 320
Protein of unknown function (DUF4038). A family of putative cellulases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54527.1 0.0 36 472 1 437
AZH70520.1 1.62e-316 36 472 1 437
QWT17210.1 4.88e-202 36 468 1 435
AEB07692.1 5.33e-195 36 470 1 456
QRT29801.1 7.28e-149 38 468 1 422

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999995 0.000036 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001108_00052.