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CAZyme Information: MGYG000001140_00229

You are here: Home > Sequence: MGYG000001140_00229

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900757705
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900757705
CAZyme ID MGYG000001140_00229
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
721 MGYG000001140_28|CGC1 78938.79 4.9418
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001140 1954271 MAG China Asia
Gene Location Start: 31559;  End: 33724  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001140_00229.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 10 328 1.1e-77 0.9791666666666666
CE19 457 698 4.5e-26 0.5993975903614458

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 6.96e-63 18 330 94 404
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam01095 Pectinesterase 5.53e-49 16 311 10 275
Pectinesterase.
PLN02990 PLN02990 9.54e-40 10 337 263 562
Probable pectinesterase/pectinesterase inhibitor
PLN02773 PLN02773 2.09e-39 10 322 9 290
pectinesterase
PLN02708 PLN02708 3.14e-39 16 336 251 550
Probable pectinesterase/pectinesterase inhibitor

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54718.1 0.0 1 721 1 721
QIA34433.1 0.0 1 719 1 719
QUC03567.1 0.0 9 717 8 711
QRP39805.1 4.94e-104 10 336 20 349
ASN95501.1 4.94e-104 10 336 20 349

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3UW0_A 1.66e-25 18 288 44 310
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
1XG2_A 6.13e-25 10 315 7 284
ChainA, Pectinesterase 1 [Solanum lycopersicum]
5C1E_A 1.98e-24 15 278 16 245
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
5C1C_A 3.63e-24 15 278 16 245
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1GQ8_A 2.86e-21 10 310 11 281
Pectinmethylesterase from Carrot [Daucus carota]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8GXA1 4.64e-37 10 337 260 559
Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana OX=3702 GN=PME23 PE=2 SV=3
Q43043 2.16e-29 10 334 61 359
Pectinesterase OS=Petunia integrifolia OX=4103 GN=PPE1 PE=2 SV=1
Q43062 1.56e-28 41 310 239 482
Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica OX=3760 PE=2 SV=1
O81320 1.68e-28 10 311 167 437
Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana OX=3702 GN=PME38 PE=3 SV=1
O04887 4.46e-28 10 315 205 479
Pectinesterase 2 OS=Citrus sinensis OX=2711 GN=PECS-2.1 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000044 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001140_00229.