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CAZyme Information: MGYG000001182_01195

You are here: Home > Sequence: MGYG000001182_01195

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-269 sp000435535
Lineage Bacteria; Firmicutes_A; Clostridia; TANB77; CAG-508; CAG-269; CAG-269 sp000435535
CAZyme ID MGYG000001182_01195
CAZy Family CBM51
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1201 137870.1 5.4453
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001182 1766269 MAG Austria Europe
Gene Location Start: 140941;  End: 144546  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001182_01195.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM51 41 187 1.2e-27 0.9776119402985075
CBM32 867 975 7.3e-19 0.8064516129032258

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08305 NPCBM 3.12e-36 37 188 1 136
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
smart00776 NPCBM 9.34e-18 40 187 6 144
This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.
cd14256 Dockerin_I 5.37e-15 1143 1200 1 57
Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.
pfam00754 F5_F8_type_C 4.69e-13 870 978 9 119
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00404 Dockerin_1 2.15e-11 1144 1200 1 56
Dockerin type I repeat. The dockerin repeat is the binding partner of the cohesin domain pfam00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCL58565.1 0.0 36 1146 78 1202
QZA21247.1 6.71e-202 36 1003 137 1104
SQF53247.1 6.71e-202 36 1003 137 1104
ACG61564.1 8.01e-202 36 1003 144 1111
QGM22805.1 9.41e-202 30 1003 131 1104

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JS4_A 6.39e-12 56 187 625 752
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
2VMH_A 9.59e-10 46 187 10 150
Thestructure of CBM51 from Clostridium perfringens GH95 [Clostridium perfringens]
2VMG_A 1.09e-09 46 187 16 156
Thestructure of CBM51 from Clostridium perfringens GH95 in complex with methyl-galactose [Clostridium perfringens]
2VMI_A 1.77e-09 46 187 10 150
Thestructure of seleno-methionine labelled CBM51 from Clostridium perfringens GH95 [Clostridium perfringens]
2YGL_A 1.21e-07 31 167 183 330
TheX-ray crystal structure of tandem CBM51 modules of Sp3GH98, the family 98 glycoside hydrolase from Streptococcus pneumoniae SP3-BS71 [Streptococcus pneumoniae SP3-BS71],2YGL_B The X-ray crystal structure of tandem CBM51 modules of Sp3GH98, the family 98 glycoside hydrolase from Streptococcus pneumoniae SP3-BS71 [Streptococcus pneumoniae SP3-BS71],2YGM_A The X-Ray Crystal Structure Of Tandem Cbm51 Modules Of Sp3gh98, The Family 98 Glycoside Hydrolase From Streptococcus Pneumoniae Sp3-Bs71, In Complex With The Blood Group B Antigen [Streptococcus pneumoniae SP3-BS71],2YGM_B The X-Ray Crystal Structure Of Tandem Cbm51 Modules Of Sp3gh98, The Family 98 Glycoside Hydrolase From Streptococcus Pneumoniae Sp3-Bs71, In Complex With The Blood Group B Antigen [Streptococcus pneumoniae SP3-BS71]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P29767 7.17e-06 865 1056 59 244
Sialidase OS=Clostridium septicum OX=1504 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.476335 0.515157 0.006597 0.000567 0.000375 0.000947

TMHMM  Annotations      download full data without filtering help

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