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CAZyme Information: MGYG000001257_01735
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Massiliomicrobiota sp002160865 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelatoclostridiaceae; Massiliomicrobiota; Massiliomicrobiota sp002160865 | |||||||||||
| CAZyme ID | MGYG000001257_01735 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 130; End: 1473 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 163 | 426 | 5.5e-46 | 0.7292307692307692 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 2.34e-13 | 140 | 417 | 127 | 420 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 1.38e-12 | 167 | 389 | 50 | 273 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03010 | PLN03010 | 1.31e-07 | 201 | 372 | 166 | 320 | polygalacturonase |
| PLN02188 | PLN02188 | 4.56e-05 | 202 | 389 | 165 | 344 | polygalacturonase/glycoside hydrolase family protein |
| PLN03003 | PLN03003 | 1.85e-04 | 181 | 381 | 125 | 317 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QHW32786.1 | 5.34e-108 | 24 | 446 | 32 | 458 |
| QHT63269.1 | 2.38e-104 | 24 | 446 | 24 | 450 |
| QOY89194.1 | 3.43e-58 | 25 | 447 | 27 | 445 |
| AZN40317.1 | 6.16e-52 | 33 | 446 | 17 | 428 |
| QJC51520.1 | 1.27e-50 | 32 | 447 | 17 | 430 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P35339 | 1.63e-10 | 35 | 372 | 4 | 326 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1 |
| P35338 | 2.89e-10 | 36 | 371 | 5 | 330 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1 |
| P26216 | 6.65e-09 | 48 | 371 | 17 | 330 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000068 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |