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CAZyme Information: MGYG000001261_04156

You are here: Home > Sequence: MGYG000001261_04156

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Caulobacter sp903900155
Lineage Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter; Caulobacter sp903900155
CAZyme ID MGYG000001261_04156
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
449 47576.38 6.2453
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001261 5012197 MAG Italy Europe
Gene Location Start: 56;  End: 1405  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001261_04156.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 79 281 1.6e-64 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 2.51e-13 40 339 48 331
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 1.02e-06 81 231 3 150
Amb_all domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATC34202.1 1.02e-273 1 449 1 451
AAK25114.1 6.83e-272 1 449 1 451
ATC29979.1 6.83e-272 1 449 1 451
ACL96719.1 6.83e-272 1 449 1 451
QXZ51501.1 6.83e-272 1 449 1 451

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FI2_A 1.25e-10 34 279 46 273
VexL:A periplasmic depolymerase provides new insight into ABC transporter-dependent secretion of bacterial capsular polysaccharides [Achromobacter denitrificans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q0CLG7 9.85e-54 27 440 20 409
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
B0XMA2 1.01e-53 27 440 21 410
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 1.41e-53 27 440 21 410
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
A1DPF0 1.97e-53 27 440 21 410
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B8NQQ7 2.69e-53 27 440 20 409
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000473 0.998741 0.000192 0.000230 0.000179 0.000161

TMHMM  Annotations      download full data without filtering help

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