Species | Atlantibacter hermannii | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Atlantibacter; Atlantibacter hermannii | |||||||||||
CAZyme ID | MGYG000001266_00357 | |||||||||||
CAZy Family | AA6 | |||||||||||
CAZyme Description | NAD(P)H dehydrogenase (quinone) | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 417233; End: 417850 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
AA6 | 11 | 201 | 1.8e-83 | 0.9846153846153847 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
PRK03767 | PRK03767 | 6.55e-128 | 9 | 204 | 2 | 199 | NAD(P)H:quinone oxidoreductase; Provisional |
TIGR01755 | flav_wrbA | 4.48e-110 | 9 | 203 | 1 | 197 | NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR (SP:P03032) are not detected. [Energy metabolism, Electron transport] |
COG0655 | WrbA | 1.55e-58 | 9 | 204 | 4 | 206 | Multimeric flavodoxin WrbA [Energy production and conversion]. |
pfam03358 | FMN_red | 2.47e-12 | 23 | 150 | 17 | 143 | NADPH-dependent FMN reductase. |
COG0426 | NorV | 1.16e-11 | 4 | 131 | 242 | 349 | Flavorubredoxin [Energy production and conversion]. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
CCA36908.1 | 3.03e-63 | 11 | 205 | 5 | 201 |
AOA60972.1 | 3.03e-63 | 11 | 205 | 5 | 201 |
SOP79455.1 | 3.03e-63 | 11 | 205 | 5 | 201 |
AOA66177.1 | 3.03e-63 | 11 | 205 | 5 | 201 |
ANZ73241.1 | 4.95e-62 | 11 | 205 | 5 | 201 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
4DY4_A | 7.37e-114 | 11 | 203 | 3 | 195 | Highresolution structure of E.coli WrbA with FMN [Escherichia coli APEC O1],4DY4_C High resolution structure of E.coli WrbA with FMN [Escherichia coli APEC O1] |
2R96_A | 7.63e-114 | 11 | 203 | 4 | 196 | Crystalstructure of E. coli WrbA in complex with FMN [Escherichia coli],2R96_C Crystal structure of E. coli WrbA in complex with FMN [Escherichia coli],2R97_A Crystal structure of E. coli WrbA in complex with FMN [Escherichia coli],2R97_C Crystal structure of E. coli WrbA in complex with FMN [Escherichia coli],2RG1_A Crystal structure of E. coli WrbA apoprotein [Escherichia coli],2RG1_B Crystal structure of E. coli WrbA apoprotein [Escherichia coli],3B6I_A WrbA from Escherichia coli, native structure [Escherichia coli K-12],3B6I_B WrbA from Escherichia coli, native structure [Escherichia coli K-12],3B6J_A WrbA from Escherichia coli, NADH complex [Escherichia coli K-12],3B6J_B WrbA from Escherichia coli, NADH complex [Escherichia coli K-12],3B6K_A WrbA from Escherichia coli, Benzoquinone complex [Escherichia coli K-12],3B6K_B WrbA from Escherichia coli, Benzoquinone complex [Escherichia coli K-12],3B6M_A WrbA from Escherichia coli, second crystal form [Escherichia coli K-12],3B6M_B WrbA from Escherichia coli, second crystal form [Escherichia coli K-12] |
3ZHO_A | 6.05e-113 | 11 | 203 | 3 | 195 | X-raystructure of E.coli Wrba in complex with FMN at 1.2 A resolution [Escherichia coli],3ZHO_B X-ray structure of E.coli Wrba in complex with FMN at 1.2 A resolution [Escherichia coli],4YQE_A Crystal structure of E. coli WrbA in complex with benzoquinone [Escherichia coli K-12],4YQE_B Crystal structure of E. coli WrbA in complex with benzoquinone [Escherichia coli K-12],5F12_A WrbA in complex with FMN under crystallization conditions of WrbA-FMN-BQ structure (4YQE) [Escherichia coli K-12],5F12_B WrbA in complex with FMN under crystallization conditions of WrbA-FMN-BQ structure (4YQE) [Escherichia coli K-12] |
4LA4_A | 7.03e-72 | 11 | 203 | 5 | 203 | Crystalstructure of native PnpB [Pseudomonas sp. WBC-3],4LA4_B Crystal structure of native PnpB [Pseudomonas sp. WBC-3],4LAF_A Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3],4LAF_B Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3],4LAF_C Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3],4LAF_D Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3] |
5F4B_A | 9.29e-64 | 9 | 203 | 5 | 200 | Structureof B. abortus WrbA-related protein A (WrpA) [Brucella abortus 2308],5F4B_B Structure of B. abortus WrbA-related protein A (WrpA) [Brucella abortus 2308] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q3Z3B7 | 5.66e-114 | 8 | 203 | 4 | 199 | NAD(P)H dehydrogenase (quinone) OS=Shigella sonnei (strain Ss046) OX=300269 GN=SSON_1014 PE=3 SV=1 |
B4TEP2 | 1.46e-113 | 11 | 203 | 4 | 196 | NAD(P)H dehydrogenase (quinone) OS=Salmonella heidelberg (strain SL476) OX=454169 GN=SeHA_C1229 PE=3 SV=1 |
B5R6H0 | 1.46e-113 | 11 | 203 | 4 | 196 | NAD(P)H dehydrogenase (quinone) OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) OX=550538 GN=SG1008 PE=3 SV=1 |
B4TSN0 | 1.46e-113 | 11 | 203 | 4 | 196 | NAD(P)H dehydrogenase (quinone) OS=Salmonella schwarzengrund (strain CVM19633) OX=439843 GN=SeSA_A1183 PE=3 SV=1 |
B5F202 | 1.46e-113 | 11 | 203 | 4 | 196 | NAD(P)H dehydrogenase (quinone) OS=Salmonella agona (strain SL483) OX=454166 GN=SeAg_B1078 PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000069 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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