Species | Eubacterium limosum | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Firmicutes_A; Clostridia; Eubacteriales; Eubacteriaceae; Eubacterium; Eubacterium limosum | |||||||||||
CAZyme ID | MGYG000001276_01803 | |||||||||||
CAZy Family | GT39 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 10193; End: 12004 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GT39 | 171 | 377 | 1.2e-56 | 0.9237668161434978 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG1928 | PMT1 | 2.41e-18 | 200 | 374 | 90 | 264 | Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]. |
COG4346 | COG4346 | 8.26e-18 | 199 | 501 | 135 | 399 | Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones]. |
pfam16192 | PMT_4TMC | 2.39e-17 | 390 | 550 | 3 | 185 | C-terminal four TMM region of protein-O-mannosyltransferase. PMT_4TMC is the C-terminal four membrane-pass region of protein-O-mannosyltransferases and similar enzymes. |
pfam02366 | PMT | 4.46e-17 | 170 | 372 | 16 | 235 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families. |
COG1807 | ArnT | 5.29e-15 | 178 | 590 | 34 | 411 | 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis]. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
ADO37304.1 | 0.0 | 1 | 603 | 4 | 606 |
ARD67363.1 | 0.0 | 1 | 603 | 4 | 606 |
ALU14472.1 | 0.0 | 1 | 603 | 1 | 603 |
QCT70524.1 | 0.0 | 1 | 603 | 4 | 606 |
ANU42918.1 | 1.40e-91 | 8 | 526 | 61 | 612 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
L8F4Z2 | 1.84e-23 | 177 | 555 | 67 | 505 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycolicibacterium smegmatis (strain MKD8) OX=1214915 GN=pmt PE=3 SV=1 |
P9WN04 | 8.15e-21 | 177 | 555 | 73 | 511 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=pmt PE=3 SV=2 |
P9WN05 | 8.15e-21 | 177 | 555 | 73 | 511 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=pmt PE=1 SV=2 |
Q8NRZ6 | 5.14e-15 | 200 | 548 | 99 | 502 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=pmt PE=3 SV=1 |
Q59X23 | 3.40e-06 | 173 | 370 | 70 | 287 | Dolichyl-phosphate-mannose--protein mannosyltransferase 4 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PMT4 PE=2 SV=2 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.995007 | 0.003187 | 0.000394 | 0.000040 | 0.000017 | 0.001385 |
start | end |
---|---|
13 | 32 |
219 | 241 |
248 | 265 |
270 | 292 |
299 | 316 |
320 | 337 |
356 | 378 |
437 | 459 |
468 | 487 |
491 | 513 |
526 | 548 |
558 | 580 |
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