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CAZyme Information: MGYG000001298_02360
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Listeria grayi | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Listeriaceae; Listeria; Listeria grayi | |||||||||||
| CAZyme ID | MGYG000001298_02360 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | Cell wall-binding protein YocH | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 840841; End: 841575 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK06347 | PRK06347 | 5.22e-22 | 17 | 134 | 398 | 538 | 1,4-beta-N-acetylmuramoylhydrolase. |
| PRK06347 | PRK06347 | 1.32e-20 | 16 | 132 | 322 | 464 | 1,4-beta-N-acetylmuramoylhydrolase. |
| PRK06347 | PRK06347 | 1.17e-19 | 17 | 119 | 472 | 591 | 1,4-beta-N-acetylmuramoylhydrolase. |
| PRK10783 | mltD | 8.44e-17 | 17 | 127 | 336 | 454 | membrane-bound lytic murein transglycosylase D; Provisional |
| PRK13914 | PRK13914 | 3.06e-14 | 1 | 175 | 3 | 192 | invasion associated endopeptidase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| VEI36366.1 | 4.26e-135 | 1 | 244 | 1 | 244 |
| AIS63665.1 | 5.48e-41 | 1 | 128 | 1 | 134 |
| VEH48000.1 | 5.48e-41 | 1 | 128 | 1 | 134 |
| AIS60839.1 | 5.48e-41 | 1 | 128 | 1 | 134 |
| SNV48801.1 | 1.53e-40 | 1 | 130 | 1 | 136 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2MKX_A | 9.62e-08 | 78 | 119 | 7 | 48 | Solutionstructure of LysM the peptidoglycan binding domain of autolysin AtlA from Enterococcus faecalis [Enterococcus faecalis V583] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O31852 | 2.94e-21 | 1 | 126 | 1 | 138 | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1 |
| O34669 | 1.24e-18 | 1 | 128 | 1 | 130 | Cell wall-binding protein YocH OS=Bacillus subtilis (strain 168) OX=224308 GN=yocH PE=1 SV=1 |
| P54421 | 3.03e-18 | 28 | 126 | 89 | 199 | Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1 |
| Q49UX4 | 6.97e-14 | 1 | 121 | 1 | 131 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=sle1 PE=3 SV=1 |
| O07532 | 1.19e-13 | 28 | 121 | 177 | 285 | Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000287 | 0.998895 | 0.000214 | 0.000210 | 0.000192 | 0.000157 |
