logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001306_03056

You are here: Home > Sequence: MGYG000001306_03056

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola coprocola
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola coprocola
CAZyme ID MGYG000001306_03056
CAZy Family GH105
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
699 MGYG000001306_60|CGC3 80347.17 7.2047
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001306 4295617 Isolate not provided not provided
Gene Location Start: 258831;  End: 260930  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001306_03056.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 54 395 3.5e-119 0.9759036144578314
CE8 410 690 2.6e-102 0.9861111111111112

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07470 Glyco_hydro_88 1.25e-124 34 395 1 340
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG4225 YesR 2.45e-96 54 397 28 356
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
pfam01095 Pectinesterase 2.90e-74 411 681 3 286
Pectinesterase.
PLN02773 PLN02773 2.29e-72 408 689 5 295
pectinesterase
PLN02682 PLN02682 2.56e-66 399 689 60 360
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY37138.1 0.0 1 697 1 697
QDO69177.1 1.85e-214 11 401 12 400
QUT93209.1 1.06e-213 11 401 12 400
ALJ61262.1 1.06e-213 11 401 12 400
BCA48645.1 3.34e-209 33 399 17 384

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4WU0_A 3.73e-105 60 397 23 361
StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]
1NC5_A 6.13e-76 53 397 32 367
Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A 2.45e-75 53 397 22 357
ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
1XG2_A 2.40e-40 411 672 6 277
ChainA, Pectinesterase 1 [Solanum lycopersicum]
1GQ8_A 1.84e-37 410 672 9 281
Pectinmethylesterase from Carrot [Daucus carota]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34559 3.36e-75 53 397 32 367
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
Q9LVQ0 1.88e-50 405 689 2 295
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q8GXA1 5.97e-48 340 696 190 556
Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana OX=3702 GN=PME23 PE=2 SV=3
Q9FJ21 3.66e-46 340 696 196 558
Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana OX=3702 GN=PME58 PE=2 SV=1
Q8VYZ3 2.92e-45 418 689 94 374
Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000756 0.985004 0.013400 0.000344 0.000260 0.000218

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001306_03056.