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CAZyme Information: MGYG000001306_03858
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phocaeicola coprocola | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola coprocola | |||||||||||
| CAZyme ID | MGYG000001306_03858 | |||||||||||
| CAZy Family | GH106 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 59637; End: 62408 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH106 | 19 | 917 | 6.4e-299 | 0.9951456310679612 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam17132 | Glyco_hydro_106 | 1.09e-59 | 173 | 715 | 354 | 873 | alpha-L-rhamnosidase. |
| cd03143 | A4_beta-galactosidase_middle_domain | 0.008 | 558 | 589 | 54 | 85 | A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADY37533.1 | 0.0 | 1 | 921 | 1 | 922 |
| QUT85563.1 | 0.0 | 1 | 922 | 1 | 920 |
| AII64758.1 | 0.0 | 1 | 922 | 1 | 920 |
| QJR78009.1 | 0.0 | 1 | 922 | 1 | 920 |
| AND18210.1 | 0.0 | 1 | 922 | 1 | 920 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5MQM_A | 6.63e-39 | 173 | 876 | 367 | 1065 | Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron] |
| 5MWK_A | 1.53e-38 | 173 | 876 | 367 | 1065 | Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron] |
| 6Q2F_A | 5.99e-37 | 173 | 872 | 413 | 1102 | Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| T2KNA8 | 2.36e-43 | 27 | 785 | 38 | 760 | Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000376 | 0.998754 | 0.000235 | 0.000217 | 0.000193 | 0.000179 |