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CAZyme Information: MGYG000001330_00377

You are here: Home > Sequence: MGYG000001330_00377

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Helicobacter_D winghamensis
Lineage Bacteria; Campylobacterota; Campylobacteria; Campylobacterales; Helicobacteraceae; Helicobacter_D; Helicobacter_D winghamensis
CAZyme ID MGYG000001330_00377
CAZy Family CBM47
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
431 50330 7.4834
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001330 1654872 Isolate not provided not provided
Gene Location Start: 140190;  End: 141485  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001330_00377.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM47 19 134 2.4e-18 0.9140625

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 2.11e-09 20 134 3 116
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
smart00607 FTP 2.28e-06 15 143 8 144
eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QOQ97712.1 6.84e-302 1 417 1 417
QLD94197.1 4.52e-140 1 417 1 418
QOP67714.1 4.52e-140 1 417 1 418
APT20667.1 4.52e-140 1 417 1 418
VEJ08448.1 9.90e-95 1 417 1 419

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001330_00377.