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CAZyme Information: MGYG000001330_00580

You are here: Home > Sequence: MGYG000001330_00580

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Helicobacter_D winghamensis
Lineage Bacteria; Campylobacterota; Campylobacteria; Campylobacterales; Helicobacteraceae; Helicobacter_D; Helicobacter_D winghamensis
CAZyme ID MGYG000001330_00580
CAZy Family GT66
CAZyme Description Undecaprenyl-diphosphooligosaccharide--protein glycotransferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
623 MGYG000001330_20|CGC2 71665.98 9.1279
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001330 1654872 Isolate not provided not provided
Gene Location Start: 153140;  End: 155011  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001330_00580.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT66 16 495 4.5e-63 0.7619047619047619

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1287 Stt3 1.29e-19 1 479 9 543
Asparagine N-glycosylation enzyme, membrane subunit Stt3 [Posttranslational modification, protein turnover, chaperones].
pfam02516 STT3 1.41e-12 83 459 78 477
Oligosaccharyl transferase STT3 subunit. This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QOQ98472.1 0.0 1 623 1 618
ADM36003.1 9.99e-128 1 622 1 665
VEJ07254.1 5.56e-127 1 622 1 665
QOP40873.1 2.37e-53 14 622 19 698
QFR48868.1 5.89e-53 14 622 18 720

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3RCE_A 8.88e-34 2 622 12 710
Bacterialoligosaccharyltransferase PglB [Campylobacter lari]
5OGL_A 2.73e-33 2 622 12 710
Structureof bacterial oligosaccharyltransferase PglB in complex with an acceptor peptide and an lipid-linked oligosaccharide analog [Campylobacter lari RM2100]
6GXC_A 2.85e-33 2 622 12 710
Bacterialoligosaccharyltransferase PglB in complex with an inhibitory peptide and a reactive lipid-linked oligosaccharide analog [Campylobacter lari RM2100]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q0P9C8 7.55e-42 14 491 22 510
Undecaprenyl-diphosphooligosaccharide--protein glycotransferase OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) OX=192222 GN=pglB PE=1 SV=1
Q5HTX9 1.87e-41 14 491 22 510
Undecaprenyl-diphosphooligosaccharide--protein glycotransferase OS=Campylobacter jejuni (strain RM1221) OX=195099 GN=pglB PE=1 SV=1
B9KDD4 1.93e-33 2 622 12 710
Undecaprenyl-diphosphooligosaccharide--protein glycotransferase OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) OX=306263 GN=pglB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.982216 0.016608 0.000435 0.000075 0.000048 0.000640

TMHMM  Annotations      download full data without filtering help

start end
5 27
102 121
125 144
157 179
183 205
217 239
254 276
320 339
343 362
364 386