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CAZyme Information: MGYG000001332_00996

You are here: Home > Sequence: MGYG000001332_00996

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Massilioclostridium methylpentosum
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium methylpentosum
CAZyme ID MGYG000001332_00996
CAZy Family CBM32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1482 163818.96 4.3257
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001332 3406391 Isolate not provided not provided
Gene Location Start: 1173493;  End: 1177941  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001332_00996.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 380 921 9.2e-59 0.6286407766990292
CBM32 1004 1143 4.1e-17 0.9435483870967742
CBM32 213 337 4.9e-16 0.9516129032258065

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 1.36e-33 62 893 13 872
alpha-L-rhamnosidase.
pfam00754 F5_F8_type_C 9.33e-17 1003 1124 1 114
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00754 F5_F8_type_C 5.53e-13 222 337 8 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 1.22e-09 1004 1120 14 126
Substituted updates: Jan 31, 2002
pfam17132 Glyco_hydro_106 2.90e-08 1000 1174 172 351
alpha-L-rhamnosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCI61176.1 3.23e-250 49 934 38 1056
QGA23530.1 1.40e-137 14 919 3 730
QGT72311.1 8.23e-137 49 919 27 723
BCG54873.1 7.63e-126 43 920 19 750
AWW28862.1 3.41e-111 49 920 35 754

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E8MGH9 9.18e-07 1254 1481 1694 1932
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001406 0.392024 0.605289 0.000588 0.000382 0.000307

TMHMM  Annotations      download full data without filtering help

start end
7 29
1460 1477