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CAZyme Information: MGYG000001332_01005

You are here: Home > Sequence: MGYG000001332_01005

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Massilioclostridium methylpentosum
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium methylpentosum
CAZyme ID MGYG000001332_01005
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1564 173104.01 4.1798
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001332 3406391 Isolate not provided not provided
Gene Location Start: 1198798;  End: 1203492  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001332_01005.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 357 752 4.2e-40 0.4720873786407767
CBM32 1100 1217 1.6e-21 0.8225806451612904

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 5.87e-22 211 764 184 796
alpha-L-rhamnosidase.
pfam00754 F5_F8_type_C 1.06e-18 1096 1222 1 121
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00754 F5_F8_type_C 2.24e-11 199 300 3 112
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00754 F5_F8_type_C 1.94e-09 761 877 3 122
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 7.24e-08 1097 1237 14 143
Substituted updates: Jan 31, 2002

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCI61176.1 1.54e-190 21 1015 19 1042
QGT72311.1 6.74e-123 36 760 27 615
BCG54873.1 1.50e-118 34 1015 23 749
QGA23530.1 2.95e-116 34 1015 23 730
AWW28862.1 1.07e-107 27 1016 26 754

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
E8MGH9 4.36e-07 750 1440 1158 1871
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000342 0.998950 0.000198 0.000181 0.000156 0.000143

TMHMM  Annotations      download full data without filtering help

start end
1541 1559