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CAZyme Information: MGYG000001368_00165

You are here: Home > Sequence: MGYG000001368_00165

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Muricomes fissicatena_A
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Muricomes; Muricomes fissicatena_A
CAZyme ID MGYG000001368_00165
CAZy Family CBM32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1500 MGYG000001368_1|CGC1 164461.9 4.367
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001368 5374587 Isolate not provided not provided
Gene Location Start: 196783;  End: 201285  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001368_00165.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH95 454 898 1.2e-48 0.5831024930747922
CBM32 322 447 8e-19 0.8467741935483871

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 3.12e-14 312 447 4 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 1.43e-08 328 433 29 129
Substituted updates: Jan 31, 2002
pfam00754 F5_F8_type_C 5.07e-05 135 263 1 114
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
smart00231 FA58C 0.001 329 433 29 124
Coagulation factor 5/8 C-terminal domain, discoidin domain. Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
pfam07554 FIVAR 0.007 1353 1418 4 69
FIVAR domain. This domain is found in a wide variety of contexts, but mostly occurring in cell wall associated proteins. A lack of conserved catalytic residues suggests that it is a binding domain. From context, possible substrates are hyaluronate or fibronectin (personal obs: C Yeats). This is further evidenced by. Possibly the exact substrate is N-acetyl glucosamine. Finding it in the same protein as pfam05089 further supports this proposal. It is found in the C-terminal part of Bacillus sp. Gellan lyase, which is removed during maturation. Some of the proteins it is found in are involved in methicillin resistance. The name FIVAR derives from Found In Various Architectures.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QHW32096.1 1.73e-227 2 1142 5 1084
QXE33659.1 1.88e-181 38 1139 65 952
AWS40658.1 1.41e-170 35 1139 34 926
BCB76148.1 6.33e-146 46 1139 1 879
QKW17790.1 2.02e-87 456 1115 134 756

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8L7W8 3.87e-08 655 1068 384 789
Alpha-L-fucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=FUC95A PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000617 0.988646 0.009992 0.000301 0.000221 0.000188

TMHMM  Annotations      download full data without filtering help

start end
1473 1495