dbCAN-seq: a database of CAZyme sequence and annotation

Basic Information help

Species

Bacteroides fluxus

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides fluxus

CAZyme ID

MGYG000001370_00535

CAZy Family

GH55

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
992	MGYG000001370_10\|CGC3	110886.49	7.0639

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001370	4330086	Isolate	not provided	not provided

Gene Location

Start: 103286; End: 106264 Strand: -

Enzyme Prediction help

No EC number prediction in MGYG000001370_00535.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH55	130	469	2.5e-60	0.4689189189189189

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam12708	Pectate_lyase_3	4.35e-13	45	217	7	171	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
pfam12708	Pectate_lyase_3	2.24e-10	378	518	1	152	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
COG3386	YvrE	1.54e-08	731	982	36	274	Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism].
pfam08450	SGL	1.60e-08	896	981	145	243	SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyze diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.
COG5434	Pgu1	1.73e-08	358	439	60	146	Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits help

Hit ID	Query Start	Query End	Hit Start	Hit End
QUT65855.1	1	991	1	991
QUU01291.1	1	991	1	991
QDO68111.1	1	992	1	992
QUU00135.1	1	992	1	1005
QMI79027.1	1	992	1	1004

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3EQN_A	2.00e-15	38	599	48	630	ChainA, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]
3GQ7_A	7.61e-06	379	431	23	75	ChainA, Preneck appendage protein [Salasvirus phi29],3GQ8_A Chain A, Preneck appendage protein [Salasvirus phi29],3GQ9_A Chain A, Preneck appendage protein [Salasvirus phi29],3GQA_A Chain A, Preneck appendage protein [Salasvirus phi29]
3SUC_A	8.39e-06	379	431	23	75	ChainA, Preneck appendage protein [Bacillus phage phi29]
6QZ9_A	8.66e-06	379	431	105	157	ChainA, Pre-neck appendage protein [Salasvirus phi29],6QZ9_B Chain B, Pre-neck appendage protein [Salasvirus phi29],6QZ9_C Chain C, Pre-neck appendage protein [Salasvirus phi29],6QZ9_D Chain D, Pre-neck appendage protein [Salasvirus phi29],6QZ9_E Chain E, Pre-neck appendage protein [Salasvirus phi29],6QZ9_F Chain F, Pre-neck appendage protein [Salasvirus phi29],6QZ9_G Chain G, Pre-neck appendage protein [Salasvirus phi29],6QZ9_H Chain H, Pre-neck appendage protein [Salasvirus phi29],6QZ9_I Chain I, Pre-neck appendage protein [Salasvirus phi29],6QZ9_J Chain J, Pre-neck appendage protein [Salasvirus phi29],6QZ9_K Chain K, Pre-neck appendage protein [Salasvirus phi29],6QZ9_L Chain L, Pre-neck appendage protein [Salasvirus phi29],6QZ9_M Chain M, Pre-neck appendage protein [Salasvirus phi29],6QZ9_N Chain N, Pre-neck appendage protein [Salasvirus phi29],6QZ9_O Chain O, Pre-neck appendage protein [Salasvirus phi29],6QZ9_P Chain P, Pre-neck appendage protein [Salasvirus phi29],6QZ9_Q Chain Q, Pre-neck appendage protein [Salasvirus phi29],6QZ9_R Chain R, Pre-neck appendage protein [Salasvirus phi29],6QZ9_S Chain S, Pre-neck appendage protein [Salasvirus phi29],6QZ9_T Chain T, Pre-neck appendage protein [Salasvirus phi29],6QZ9_U Chain U, Pre-neck appendage protein [Salasvirus phi29],6QZ9_V Chain V, Pre-neck appendage protein [Salasvirus phi29],6QZ9_W Chain W, Pre-neck appendage protein [Salasvirus phi29],6QZ9_X Chain X, Pre-neck appendage protein [Salasvirus phi29],6QZ9_Y Chain Y, Pre-neck appendage protein [Salasvirus phi29],6QZ9_Z Chain Z, Pre-neck appendage protein [Salasvirus phi29],6QZ9_a Chain a, Pre-neck appendage protein [Salasvirus phi29],6QZ9_b Chain b, Pre-neck appendage protein [Salasvirus phi29],6QZ9_c Chain c, Pre-neck appendage protein [Salasvirus phi29],6QZ9_d Chain d, Pre-neck appendage protein [Salasvirus phi29],6QZ9_e Chain e, Pre-neck appendage protein [Salasvirus phi29],6QZ9_f Chain f, Pre-neck appendage protein [Salasvirus phi29],6QZ9_g Chain g, Pre-neck appendage protein [Salasvirus phi29],6QZ9_h Chain h, Pre-neck appendage protein [Salasvirus phi29],6QZ9_i Chain i, Pre-neck appendage protein [Salasvirus phi29],6QZ9_j Chain j, Pre-neck appendage protein [Salasvirus phi29],6QZF_A Chain A, Pre-neck appendage protein [Salasvirus phi29],6QZF_B Chain B, Pre-neck appendage protein [Salasvirus phi29],6QZF_C Chain C, Pre-neck appendage protein [Salasvirus phi29],6QZF_D Chain D, Pre-neck appendage protein [Salasvirus phi29],6QZF_E Chain E, Pre-neck appendage protein [Salasvirus phi29],6QZF_F Chain F, Pre-neck appendage protein [Salasvirus phi29],6QZF_G Chain G, Pre-neck appendage protein [Salasvirus phi29],6QZF_H Chain H, Pre-neck appendage protein [Salasvirus phi29],6QZF_I Chain I, Pre-neck appendage protein [Salasvirus phi29],6QZF_J Chain J, Pre-neck appendage protein [Salasvirus phi29],6QZF_K Chain K, Pre-neck appendage protein [Salasvirus phi29],6QZF_L Chain L, Pre-neck appendage protein [Salasvirus phi29],6QZF_M Chain M, Pre-neck appendage protein [Salasvirus phi29],6QZF_N Chain N, Pre-neck appendage protein [Salasvirus phi29],6QZF_O Chain O, Pre-neck appendage protein [Salasvirus phi29],6QZF_P Chain P, Pre-neck appendage protein [Salasvirus phi29],6QZF_Q Chain Q, Pre-neck appendage protein [Salasvirus phi29],6QZF_R Chain R, Pre-neck appendage protein [Salasvirus phi29],6QZF_S Chain S, Pre-neck appendage protein [Salasvirus phi29],6QZF_T Chain T, Pre-neck appendage protein [Salasvirus phi29],6QZF_U Chain U, Pre-neck appendage protein [Salasvirus phi29],6QZF_V Chain V, Pre-neck appendage protein [Salasvirus phi29],6QZF_W Chain W, Pre-neck appendage protein [Salasvirus phi29],6QZF_X Chain X, Pre-neck appendage protein [Salasvirus phi29],6QZF_Y Chain Y, Pre-neck appendage protein [Salasvirus phi29],6QZF_Z Chain Z, Pre-neck appendage protein [Salasvirus phi29],6QZF_a Chain a, Pre-neck appendage protein [Salasvirus phi29],6QZF_b Chain b, Pre-neck appendage protein [Salasvirus phi29],6QZF_c Chain c, Pre-neck appendage protein [Salasvirus phi29],6QZF_d Chain d, Pre-neck appendage protein [Salasvirus phi29],6QZF_e Chain e, Pre-neck appendage protein [Salasvirus phi29],6QZF_f Chain f, Pre-neck appendage protein [Salasvirus phi29],6QZF_g Chain g, Pre-neck appendage protein [Salasvirus phi29],6QZF_h Chain h, Pre-neck appendage protein [Salasvirus phi29],6QZF_i Chain i, Pre-neck appendage protein [Salasvirus phi29],6QZF_j Chain j, Pre-neck appendage protein [Salasvirus phi29]