logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001376_00081

You are here: Home > Sequence: MGYG000001376_00081

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Dysgonomonas gadei
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Dysgonomonas; Dysgonomonas gadei
CAZyme ID MGYG000001376_00081
CAZy Family CBM50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
482 MGYG000001376_1|CGC2 54023.24 9.9977
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001376 5166013 Isolate not provided not provided
Gene Location Start: 89716;  End: 91164  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001376_00081.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd01825 SGNH_hydrolase_peri1 1.32e-42 317 473 24 189
SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
cd00229 SGNH_hydrolase 1.78e-13 312 467 30 186
SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
pfam13472 Lipase_GDSL_2 1.82e-13 324 460 40 176
GDSL-like Lipase/Acylhydrolase family. This family of presumed lipases and related enzymes are similar to pfam00657.
pfam01476 LysM 3.27e-13 203 245 1 43
LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
cd00118 LysM 7.39e-12 201 244 1 45
Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIK56104.1 5.44e-147 10 482 7 490
QIK61460.1 2.67e-146 30 482 7 475
AXG73103.1 1.51e-128 39 480 43 470
AOE53578.1 1.18e-126 32 482 39 477
ALM49961.1 1.18e-126 32 482 39 477

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4K3U_A 1.68e-14 45 466 34 365
PeptidoglycanO-acetylesterase in action, 30 min [Neisseria meningitidis 4119],4K3U_B Peptidoglycan O-acetylesterase in action, 30 min [Neisseria meningitidis 4119],4K40_A Peptidoglycan O-acetylesterase in action, 0 min [Neisseria meningitidis LNP21362],4K40_B Peptidoglycan O-acetylesterase in action, 0 min [Neisseria meningitidis LNP21362],4K7J_A Peptidoglycan O-acetylesterase in action, 5 min [Neisseria meningitidis 4119],4K7J_B Peptidoglycan O-acetylesterase in action, 5 min [Neisseria meningitidis 4119]
4K9S_A 1.29e-12 52 466 41 365
PeptidoglycanO-acetylesterase in action, setmet [Neisseria meningitidis 4119],4K9S_B Peptidoglycan O-acetylesterase in action, setmet [Neisseria meningitidis 4119]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q2YVT4 1.74e-06 151 342 37 228
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) OX=273036 GN=sle1 PE=3 SV=1
Q5HRU2 2.93e-06 185 300 68 187
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=sle1 PE=3 SV=1
Q8CMN2 2.93e-06 185 300 68 187
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=sle1 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.038511 0.709561 0.250730 0.000395 0.000353 0.000425

TMHMM  Annotations      download full data without filtering help

start end
7 24