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CAZyme Information: MGYG000001376_02277

You are here: Home > Sequence: MGYG000001376_02277

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Dysgonomonas gadei
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Dysgonomonas; Dysgonomonas gadei
CAZyme ID MGYG000001376_02277
CAZy Family PL21
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
903 MGYG000001376_5|CGC4 103775.55 6.362
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001376 5166013 Isolate not provided not provided
Gene Location Start: 253097;  End: 255808  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001376_02277.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL21 534 601 6.5e-30 0.9861111111111112

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam18675 HepII_C 5.32e-08 820 891 12 84
Heparinase II C-terminal domain. Heparinase II (HepII) is an 85-kDa dimeric enzyme that depolymerizes both heparin and heparan sulfate glycosaminoglycans. The protein is composed of three domains: an N-terminal alpha-helical domain, a central two-layered beta-sheet domain, and a C-terminal domain forming a two-layered beta-sheet. The C-terminal domain contains nine beta-strands packed together in a manner resembling a beta-barrel.
pfam16332 DUF4962 1.58e-06 186 471 134 445
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SCD19147.1 0.0 18 899 34 914
QJB33697.1 1.55e-305 14 897 10 896
QJB40222.1 2.20e-305 14 897 10 896
QQS98221.1 5.78e-304 41 899 32 900
QQT38071.1 7.58e-303 13 899 4 904

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2FUQ_A 5.85e-95 185 891 19 743
ChainA, heparinase II protein [Pedobacter heparinus],2FUQ_B Chain B, heparinase II protein [Pedobacter heparinus]
3E80_A 6.12e-95 185 891 21 745
Structureof Heparinase II complexed with heparan sulfate degradation disaccharide product [Pedobacter heparinus],3E80_B Structure of Heparinase II complexed with heparan sulfate degradation disaccharide product [Pedobacter heparinus],3E80_C Structure of Heparinase II complexed with heparan sulfate degradation disaccharide product [Pedobacter heparinus]
3E7J_A 3.17e-92 185 891 21 745
ChainA, Heparinase II protein [Pedobacter heparinus],3E7J_B Chain B, Heparinase II protein [Pedobacter heparinus]
2FUT_A 8.24e-91 185 891 20 744
ChainA, heparinase II protein [Pedobacter heparinus],2FUT_B Chain B, heparinase II protein [Pedobacter heparinus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
C6XZB6 5.60e-94 185 891 44 768
Heparin and heparin-sulfate lyase OS=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3) OX=485917 GN=hepB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000363 0.998944 0.000198 0.000164 0.000152 0.000139

TMHMM  Annotations      download full data without filtering help

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