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CAZyme Information: MGYG000001381_00924
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Neisseria macacae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Neisseriaceae; Neisseria; Neisseria macacae | |||||||||||
| CAZyme ID | MGYG000001381_00924 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 108202; End: 110334 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH23 | 98 | 239 | 5.1e-25 | 0.9185185185185185 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK10783 | mltD | 4.59e-74 | 44 | 380 | 45 | 397 | membrane-bound lytic murein transglycosylase D; Provisional |
| cd16894 | MltD-like | 9.88e-62 | 106 | 233 | 1 | 127 | Membrane-bound lytic murein transglycosylase D and similar proteins. Lytic transglycosylases (LT) catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc). Membrane-bound lytic murein transglycosylase D protein (MltD) family members may have one or more small LysM domains, which may contribute to peptidoglycan binding. Unlike the similar "goose-type" lysozymes, LTs also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, as well as the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). |
| pfam01464 | SLT | 8.79e-25 | 102 | 209 | 2 | 110 | Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems. |
| cd00254 | LT-like | 3.69e-21 | 122 | 232 | 11 | 108 | lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
| PRK10783 | mltD | 2.12e-18 | 601 | 707 | 337 | 446 | membrane-bound lytic murein transglycosylase D; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QMT39231.1 | 0.0 | 1 | 710 | 1 | 710 |
| QKI22231.1 | 0.0 | 1 | 710 | 1 | 702 |
| ARC49890.1 | 0.0 | 1 | 710 | 1 | 691 |
| AVR79342.1 | 0.0 | 1 | 710 | 1 | 691 |
| QTM23360.1 | 0.0 | 1 | 710 | 1 | 692 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1E0G_A | 1.01e-07 | 664 | 708 | 2 | 46 | LYSMDomain from E.coli MLTD [Escherichia coli] |
| 6FBT_A | 1.64e-06 | 122 | 232 | 474 | 587 | ChainA, Lytic murein transglycosylase [Pseudomonas aeruginosa] |
| 5OHU_A | 1.68e-06 | 122 | 232 | 503 | 616 | TheX-ray Structure of Lytic Transglycosylase Slt from Pseudomonas aeruginosa [Pseudomonas aeruginosa] |
| 6FCQ_A | 3.75e-06 | 122 | 232 | 474 | 587 | ChainA, Soluble lytic murein transglycosylase [Pseudomonas aeruginosa],6FCR_A Chain A, Soluble lytic murein transglycosylase [Pseudomonas aeruginosa],6FCS_A Chain A, Soluble lytic murein transglycosylase [Pseudomonas aeruginosa],6FCU_A Chain A, Soluble lytic murein transglycosylase [Pseudomonas aeruginosa] |
| 6FC4_A | 3.76e-06 | 122 | 232 | 475 | 588 | ChainA, Soluble lytic murein transglycosylase [Pseudomonas aeruginosa] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P0AEZ8 | 1.67e-58 | 54 | 376 | 57 | 390 | Membrane-bound lytic murein transglycosylase D OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=mltD PE=3 SV=1 |
| P0AEZ7 | 1.67e-58 | 54 | 376 | 57 | 390 | Membrane-bound lytic murein transglycosylase D OS=Escherichia coli (strain K12) OX=83333 GN=mltD PE=1 SV=1 |
| P32820 | 3.65e-31 | 94 | 262 | 21 | 186 | Putative tributyltin chloride resistance protein OS=Alteromonas sp. (strain M-1) OX=29457 GN=tbtA PE=3 SV=1 |
| P0C1U7 | 1.34e-09 | 602 | 710 | 21 | 137 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus OX=1280 GN=sle1 PE=3 SV=1 |
| Q2G0U9 | 1.34e-09 | 602 | 710 | 21 | 137 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=sle1 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000462 | 0.998789 | 0.000184 | 0.000194 | 0.000174 | 0.000158 |