Species | Ralstonia pickettii | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia; Ralstonia pickettii | |||||||||||
CAZyme ID | MGYG000001384_04129 | |||||||||||
CAZy Family | GT51 | |||||||||||
CAZyme Description | Biosynthetic peptidoglycan transglycosylase | |||||||||||
CAZyme Property |
|
|||||||||||
Genome Property |
|
|||||||||||
Gene Location | Start: 1056350; End: 1057054 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GT51 | 57 | 226 | 1.2e-58 | 0.9322033898305084 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
TIGR02070 | mono_pep_trsgly | 6.06e-125 | 6 | 233 | 1 | 224 | monofunctional biosynthetic peptidoglycan transglycosylase. This family is one of the transglycosylases involved in the late stages of peptidoglycan biosynthesis. Members tend to be small, about 240 amino acids in length, and consist almost entirely of a domain described by pfam00912 for transglycosylases. Species with this protein will have several other transglycosylases as well. All species with this protein are Proteobacteria that produce murein (peptidoglycan). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan] |
PRK00056 | mtgA | 2.50e-119 | 1 | 234 | 1 | 230 | monofunctional biosynthetic peptidoglycan transglycosylase; Provisional |
COG0744 | MrcB | 2.48e-78 | 1 | 230 | 17 | 243 | Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis]. |
pfam00912 | Transgly | 2.56e-67 | 60 | 227 | 13 | 176 | Transglycosylase. The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyzes the polymerization of murein glycan chains. |
TIGR02074 | PBP_1a_fam | 2.18e-47 | 59 | 227 | 1 | 165 | penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QQK36270.1 | 4.51e-173 | 1 | 234 | 1 | 234 |
AJW44398.1 | 3.99e-167 | 1 | 234 | 1 | 234 |
QIF08431.1 | 3.99e-167 | 1 | 234 | 1 | 234 |
ANJ73633.1 | 8.05e-167 | 1 | 234 | 1 | 234 |
ANA32929.1 | 1.14e-166 | 1 | 234 | 1 | 234 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
2OQO_A | 4.00e-30 | 55 | 204 | 14 | 164 | Crystalstructure of a peptidoglycan glycosyltransferase from a class A PBP: insight into bacterial cell wall synthesis [Aquifex aeolicus VF5],3D3H_A Crystal structure of a complex of the peptidoglycan glycosyltransferase domain from Aquifex aeolicus and neryl moenomycin A [Aquifex aeolicus],3NB7_A Crystal structure of Aquifex Aeolicus Peptidoglycan Glycosyltransferase in complex with Decarboxylated Neryl Moenomycin [Aquifex aeolicus] |
3NB6_A | 1.57e-29 | 55 | 204 | 14 | 164 | Crystalstructure of Aquifex aeolicus peptidoglycan glycosyltransferase in complex with Methylphosphoryl Neryl Moenomycin [Aquifex aeolicus] |
4OON_A | 1.42e-24 | 63 | 204 | 42 | 183 | Crystalstructure of PBP1a in complex with compound 17 ((4Z,8S,11E,14S)-5-(2-amino-1,3-thiazol-4-yl)-14-(5,6-dihydroxy-1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)-8-formyl-2-methyl-6-oxo-3,10-dioxa-4,7,11-triazatetradeca-4,11-diene-2,12,14-tricarboxylic acid) [Pseudomonas aeruginosa PAO1] |
3UDF_A | 9.74e-21 | 63 | 204 | 42 | 183 | ChainA, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDF_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDI_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDI_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDX_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UDX_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE0_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE0_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE1_A Chain A, Penicillin-binding protein 1a [Acinetobacter baumannii],3UE1_B Chain B, Penicillin-binding protein 1a [Acinetobacter baumannii] |
3DWK_A | 7.81e-20 | 63 | 204 | 30 | 171 | ChainA, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL],3DWK_B Chain B, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL],3DWK_C Chain C, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL],3DWK_D Chain D, Penicillin-binding protein 2 [Staphylococcus aureus subsp. aureus COL] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q8XVQ4 | 1.22e-162 | 1 | 234 | 1 | 234 | Biosynthetic peptidoglycan transglycosylase OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=mtgA PE=3 SV=1 |
Q46XB8 | 4.40e-135 | 2 | 234 | 20 | 252 | Biosynthetic peptidoglycan transglycosylase OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) OX=264198 GN=mtgA PE=3 SV=1 |
Q1LIV1 | 2.05e-131 | 2 | 234 | 1 | 233 | Biosynthetic peptidoglycan transglycosylase OS=Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34) OX=266264 GN=mtgA PE=3 SV=1 |
Q2SZD0 | 1.30e-90 | 3 | 233 | 28 | 253 | Biosynthetic peptidoglycan transglycosylase OS=Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264) OX=271848 GN=mtgA PE=3 SV=1 |
Q63QP9 | 3.71e-90 | 3 | 233 | 28 | 253 | Biosynthetic peptidoglycan transglycosylase OS=Burkholderia pseudomallei (strain K96243) OX=272560 GN=mtgA PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.999916 | 0.000100 | 0.000006 | 0.000001 | 0.000000 | 0.000008 |
Copyright 2022 © YIN LAB, UNL. All rights reserved. Designed by Jinfang Zheng and Boyang Hu. Maintained by Yanbin Yin.