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CAZyme Information: MGYG000001392_00396

You are here: Home > Sequence: MGYG000001392_00396

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Campylobacter_A concisus_R
Lineage Bacteria; Campylobacterota; Campylobacteria; Campylobacterales; Campylobacteraceae; Campylobacter_A; Campylobacter_A concisus_R
CAZyme ID MGYG000001392_00396
CAZy Family GT30
CAZyme Description 3-deoxy-D-manno-octulosonic acid transferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
391 MGYG000001392_1|CGC3 44575.92 9.5547
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001392 1890016 Isolate not provided not provided
Gene Location Start: 407476;  End: 408651  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001392_00396.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT30 45 206 2.9e-40 0.9717514124293786

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK05749 PRK05749 1.77e-137 18 391 9 410
3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
COG1519 KdtA 1.37e-100 19 388 7 405
3-deoxy-D-manno-octulosonic-acid transferase [Cell wall/membrane/envelope biogenesis].
pfam04413 Glycos_transf_N 5.91e-41 65 205 18 173
3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
EAT98276.1 3.41e-239 36 391 23 378
QPI06602.1 9.77e-239 18 391 4 378
QPH87987.1 1.97e-238 18 391 4 378
QPI02935.1 1.97e-238 18 391 4 378
QPH97614.1 1.97e-238 36 391 23 378

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2XCI_A 2.50e-17 66 351 46 322
Membrane-embeddedmonofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_B Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_C Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_D Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCU_A Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_B Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_C Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_D Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus]
4BFC_A 5.96e-12 207 346 25 169
ChainA, 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE [Acinetobacter baumannii]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8R6G8 3.95e-37 66 342 45 345
Bifunctional glycosyltransferase/methyltransferase OS=Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355) OX=190304 GN=trmB PE=3 SV=1
P44806 2.71e-28 41 350 30 364
3-deoxy-D-manno-octulosonic acid transferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=waaA PE=1 SV=1
P0AC77 2.99e-26 42 351 31 363
3-deoxy-D-manno-octulosonic acid transferase OS=Escherichia coli O157:H7 OX=83334 GN=waaA PE=3 SV=1
P0AC76 2.99e-26 42 351 31 363
3-deoxy-D-manno-octulosonic acid transferase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=waaA PE=3 SV=1
P0AC75 2.99e-26 42 351 31 363
3-deoxy-D-manno-octulosonic acid transferase OS=Escherichia coli (strain K12) OX=83333 GN=waaA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000018 0.000012 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
17 36