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CAZyme Information: MGYG000001404_03435
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Paenibacillus_L senegalensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_L; Paenibacillus_L senegalensis | |||||||||||
| CAZyme ID | MGYG000001404_03435 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 467688; End: 470963 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 86 | 266 | 7.1e-57 | 0.994535519125683 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| smart00656 | Amb_all | 1.87e-16 | 80 | 269 | 3 | 189 | Amb_all domain. |
| COG3401 | FN3 | 1.21e-15 | 666 | 1003 | 8 | 340 | Fibronectin type 3 domain [General function prediction only]. |
| COG3866 | PelB | 6.34e-14 | 8 | 349 | 5 | 341 | Pectate lyase [Carbohydrate transport and metabolism]. |
| COG3401 | FN3 | 4.79e-11 | 653 | 815 | 181 | 332 | Fibronectin type 3 domain [General function prediction only]. |
| cd00063 | FN3 | 1.12e-06 | 731 | 825 | 1 | 93 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QGH32754.1 | 0.0 | 8 | 1088 | 8 | 1079 |
| QDP97425.1 | 7.71e-314 | 25 | 818 | 47 | 818 |
| AVT41103.1 | 3.39e-99 | 30 | 436 | 2 | 392 |
| AVT34190.1 | 6.58e-99 | 30 | 436 | 2 | 392 |
| QMW43898.1 | 1.05e-87 | 32 | 440 | 20 | 418 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B8NQQ7 | 5.61e-88 | 32 | 440 | 20 | 418 | Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1 |
| Q2UB83 | 7.63e-87 | 32 | 440 | 20 | 418 | Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1 |
| A1DPF0 | 7.26e-84 | 19 | 436 | 6 | 415 | Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1 |
| Q4WL88 | 4.90e-82 | 19 | 436 | 6 | 415 | Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1 |
| B0XMA2 | 4.90e-82 | 19 | 436 | 6 | 415 | Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000228 | 0.999127 | 0.000172 | 0.000164 | 0.000153 | 0.000139 |