Species | Staphylococcus schleiferi | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus schleiferi | |||||||||||
CAZyme ID | MGYG000001437_01288 | |||||||||||
CAZy Family | GH33 | |||||||||||
CAZyme Description | Sialidase B | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 1341627; End: 1342868 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH33 | 42 | 413 | 1.7e-58 | 0.7602339181286549 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG4409 | NanH | 9.69e-106 | 36 | 409 | 260 | 636 | Neuraminidase (sialidase) [Carbohydrate transport and metabolism, Cell wall/membrane/envelope biogenesis]. |
cd15482 | Sialidase_non-viral | 8.80e-45 | 38 | 413 | 2 | 267 | Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases. |
pfam13088 | BNR_2 | 9.72e-11 | 267 | 386 | 85 | 205 | BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
CAD7359312.1 | 2.16e-302 | 1 | 413 | 1 | 413 |
ARJ50156.1 | 1.42e-222 | 1 | 413 | 1 | 411 |
QIV99422.1 | 3.44e-219 | 29 | 413 | 10 | 394 |
QQM99222.1 | 3.44e-219 | 29 | 413 | 10 | 394 |
QDX53490.1 | 3.44e-219 | 29 | 413 | 10 | 394 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
4XE9_A | 1.65e-147 | 39 | 413 | 194 | 571 | Crystalstructure of the NanB sialidase from Streptococcus pneumoniae in complex with Optactin [Streptococcus pneumoniae TIGR4],4XHB_A Crystal structure of the NanB sialidase from streptococcus pneumoniae in complex with pentanediol and CHES [Streptococcus pneumoniae TIGR4],4XHX_A Crystal structure of the NanB sialidase from streptococcus pneumoniae in complex with Optactin and 2-[(3-Chlorobenzyl)ammonio]ethanesulfonate [Streptococcus pneumoniae TIGR4],4XIK_A Crystal structure of NanB sialidase from streptococcus pneumoniae in complex with DMSO [Streptococcus pneumoniae TIGR4],4XIL_A Crystal structure of the NanB sialidase from streptococcus pneumoniae in complex with Optactin at pH 7.4 in PBS with MPD as the cryoprotectant [Streptococcus pneumoniae TIGR4],4XIO_A Crystal structure of apo NanB sialidase from streptococcus pneumoniae at pH 8.0 with MPD as the cryoprotectant [Streptococcus pneumoniae TIGR4],4XJ8_A Crystal structure of apo NanB sialidase from streptococcus pneumoniae at pH 5.0 in 50mM sodium Acetate with DMSO [Streptococcus pneumoniae TIGR4],4XJ9_A Crystal structure of the NanB sialidase from streptococcus pneumoniae in complex with Optactin at pH 5.0 in 50mM Sodium Acetate with DMSO as the cryoprotectant [Streptococcus pneumoniae TIGR4],4XJA_A Crystal structure of the NanB sialidase from streptococcus pneumoniae in complex with 5-acetamido-2,3-difluoro-3-hydroxy-6-[1,2,3-trihydroxypropyl]oxane-2-carboxylic acid [Streptococcus pneumoniae TIGR4],4XJU_A Crystal structure of the NanB sialidase from streptococcus pneumoniae in complex with 4-acetamido-2-fluoro-3-hydroxy-6-[1,2-dihydroxyethyl]-7,8-dioxabicyclo[3.2.1]octane-1-carboxylic acid [Streptococcus pneumoniae TIGR4],4XJW_A Crystal structure of the NanB sialidase from streptococcus pneumoniae in complex with Optactin at pH 7.4 in PBS with DMSO as the cryoprotectant [Streptococcus pneumoniae TIGR4],4XJZ_A Crystal structure of apo NanB sialidase from streptococcus pneumoniae at pH 7.4 in PBS with DMSO [Streptococcus pneumoniae TIGR4] |
4XMA_A | 1.65e-147 | 39 | 413 | 194 | 571 | Crystalstructure of the K499G mutant of NanB sialidase from streptococcus pneumoniae in complex with Optactin [Streptococcus pneumoniae TIGR4],4XMI_A Crystal structure of the K499G mutant of NanB sialidase from Streptococcus pneumoniae [Streptococcus pneumoniae TIGR4] |
4XOG_A | 1.75e-147 | 39 | 413 | 196 | 573 | CRYSTALSTRUCTURE OF THE NANB SIALIDASE FROM STREPTOCOCCUS PNEUMONIAE IN COMPLEX WITH Optactin and DANA [Streptococcus pneumoniae TIGR4] |
4XYX_A | 1.75e-147 | 39 | 413 | 193 | 570 | NanBplus Optactamide [Streptococcus pneumoniae] |
2JKB_A | 3.79e-147 | 39 | 413 | 221 | 598 | Crystalstructure of Streptococcus pneumoniae NanB in complex with 2, 7-anhydro-Neu5Ac [Streptococcus pneumoniae TIGR4] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q54727 | 2.87e-146 | 39 | 413 | 232 | 609 | Sialidase B OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=nanB PE=1 SV=2 |
Q27701 | 4.39e-106 | 34 | 413 | 275 | 663 | Anhydrosialidase OS=Macrobdella decora OX=6405 PE=1 SV=1 |
P29767 | 7.77e-38 | 38 | 413 | 383 | 742 | Sialidase OS=Clostridium septicum OX=1504 PE=3 SV=1 |
P62575 | 5.32e-25 | 33 | 413 | 323 | 712 | Sialidase A OS=Streptococcus pneumoniae OX=1313 GN=nanA PE=1 SV=1 |
P62576 | 5.32e-25 | 33 | 413 | 323 | 712 | Sialidase A OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=nanA PE=1 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.031964 | 0.963729 | 0.003368 | 0.000345 | 0.000262 | 0.000290 |
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