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CAZyme Information: MGYG000001443_03869
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Streptomyces albus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albus | |||||||||||
| CAZyme ID | MGYG000001443_03869 | |||||||||||
| CAZy Family | CBM6 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1647644; End: 1650088 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM6 | 689 | 812 | 9.1e-23 | 0.8913043478260869 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam07995 | GSDH | 3.23e-41 | 62 | 471 | 3 | 319 | Glucose / Sorbosone dehydrogenase. Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold. |
| COG2133 | YliI | 6.04e-30 | 44 | 489 | 49 | 394 | Glucose/arabinose dehydrogenase, beta-propeller fold [Carbohydrate transport and metabolism]. |
| cd04084 | CBM6_xylanase-like | 4.79e-26 | 690 | 810 | 1 | 122 | Carbohydrate Binding Module 6 (CBM6); many are appended to glycoside hydrolase (GH) family 11 and GH43 xylanase domains. This family includes carbohydrate binding module 6 (CBM6) domains that are appended mainly to glycoside hydrolase (GH) family domains, including GH3, GH11, and GH43 domains. These CBM6s are non-catalytic carbohydrate binding domains that facilitate the strong binding of the GH catalytic modules with their dedicated, insoluble substrates. Examples of proteins having CMB6s belonging to this family are Microbispora bispora GghA, a 1,4-beta-D-glucan glucohydrolase (GH3); Clostridium thermocellum xylanase U (GH11), and Penicillium purpurogenum ABF3, a bifunctional alpha-L-arabinofuranosidase/xylobiohydrolase (GH43). GH3 comprises enzymes with activities including beta-glucosidase (hydrolyzes beta-galactosidase) and beta-xylosidase (hydrolyzes 1,4-beta-D-xylosidase). GH11 family comprises enzymes with xylanase (endo-1,4-beta-xylanase) activity which catalyze the hydrolysis of beta-1,4 bonds of xylan, the major component of hemicelluloses, to generate xylooligosaccharides and xylose. GH43 includes beta-xylosidases and beta-xylanases, using aryl-glycosides as substrates. CBM6 is an unusual CBM as it represents a chimera of two distinct binding sites with different modes of binding: binding site I within the loop regions and binding site II on the concave face of the beta-sandwich fold. |
| pfam03422 | CBM_6 | 1.10e-22 | 693 | 812 | 1 | 124 | Carbohydrate binding module (family 6). |
| smart00606 | CBD_IV | 9.57e-21 | 685 | 811 | 1 | 129 | Cellulose Binding Domain Type IV. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QID38929.1 | 0.0 | 1 | 814 | 1 | 814 |
| QHF98722.1 | 0.0 | 12 | 813 | 1 | 804 |
| QNF59424.1 | 0.0 | 64 | 813 | 1 | 751 |
| QPP05730.1 | 0.0 | 4 | 814 | 86 | 904 |
| AXK36996.1 | 0.0 | 61 | 813 | 2 | 751 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1W9S_A | 2.07e-08 | 681 | 798 | 2 | 124 | ChainA, Bh0236 Protein [Halalkalibacterium halodurans],1W9S_B Chain B, Bh0236 Protein [Halalkalibacterium halodurans],1W9T_A Chain A, Bh0236 Protein [Halalkalibacterium halodurans],1W9T_B Chain B, Bh0236 Protein [Halalkalibacterium halodurans],1W9W_A Chain A, Bh0236 Protein [Halalkalibacterium halodurans] |
| 4L9D_A | 3.96e-06 | 513 | 567 | 19 | 73 | Crystalstructure of the PKD1 domain from Vibrio cholerae metalloprotease PrtV [Vibrio cholerae M66-2],4L9D_B Crystal structure of the PKD1 domain from Vibrio cholerae metalloprotease PrtV [Vibrio cholerae M66-2] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q96JK4 | 3.24e-14 | 101 | 330 | 244 | 439 | HHIP-like protein 1 OS=Homo sapiens OX=9606 GN=HHIPL1 PE=1 SV=2 |
| Q14DK5 | 6.37e-10 | 69 | 330 | 228 | 445 | HHIP-like protein 1 OS=Mus musculus OX=10090 GN=Hhipl1 PE=2 SV=1 |
| P45796 | 3.82e-09 | 676 | 814 | 363 | 512 | Arabinoxylan arabinofuranohydrolase OS=Paenibacillus polymyxa OX=1406 GN=xynD PE=1 SV=1 |
| Q94F08 | 1.88e-07 | 189 | 489 | 371 | 637 | HIPL2 protein OS=Arabidopsis thaliana OX=3702 GN=HIPL2 PE=2 SV=2 |
| Q9SSG3 | 2.92e-06 | 187 | 489 | 367 | 626 | HIPL1 protein OS=Arabidopsis thaliana OX=3702 GN=HIPL1 PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.003635 | 0.709217 | 0.005696 | 0.278105 | 0.002947 | 0.000373 |
