Species | Cetobacterium_A somerae | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Fusobacteriota; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Cetobacterium_A; Cetobacterium_A somerae | |||||||||||
CAZyme ID | MGYG000001458_01226 | |||||||||||
CAZy Family | GH23 | |||||||||||
CAZyme Description | Membrane-bound lytic murein transglycosylase F | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 20513; End: 21082 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH23 | 55 | 167 | 8.3e-30 | 0.8444444444444444 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
cd00254 | LT-like | 2.17e-45 | 57 | 160 | 1 | 110 | lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
cd16896 | LT_Slt70-like | 4.07e-42 | 43 | 160 | 4 | 144 | uncharacterized lytic transglycosylase subfamily with similarity to Slt70. Uncharacterized lytic transglycosylase (LT) with a conserved sequence pattern suggesting similarity to the Slt70, a 70kda soluble lytic transglycosylase which also has an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
cd13401 | Slt70-like | 1.73e-34 | 44 | 157 | 8 | 143 | 70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda. |
pfam01464 | SLT | 7.91e-29 | 46 | 152 | 1 | 114 | Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems. |
cd13403 | MLTF-like | 1.03e-26 | 46 | 139 | 1 | 101 | membrane-bound lytic murein transglycosylase F (MLTF) and similar proteins. This subfamily includes membrane-bound lytic murein transglycosylase F (MltF, murein lyase F) that degrades murein glycan strands. It is responsible for catalyzing the release of 1,6-anhydromuropeptides from peptidoglycan. Lytic transglycosylase catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc) as do goose-type lysozymes. However, in addition, it also makes a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
EEO42572.1 | 7.15e-45 | 4 | 187 | 2 | 189 |
EFG34987.1 | 1.01e-44 | 4 | 187 | 2 | 189 |
QQB74851.1 | 1.84e-43 | 13 | 187 | 12 | 193 |
ALF24927.1 | 7.39e-43 | 13 | 187 | 12 | 193 |
ATV71382.1 | 2.09e-42 | 13 | 187 | 12 | 193 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
6FPN_B | 1.38e-11 | 44 | 157 | 428 | 559 | Lytictransglycosylase in action [Neisseria meningitidis MC58] |
5O24_A | 1.38e-11 | 44 | 157 | 432 | 563 | Lytictransglycosylase in action [Neisseria meningitidis] |
5O1J_A | 1.38e-11 | 44 | 157 | 422 | 553 | Lytictransglycosylase in action [Neisseria meningitidis MC58] |
5MPQ_A | 1.38e-11 | 44 | 157 | 418 | 549 | BulgecinA: The key to a broad-spectrum inhibitor that targets lytic transglycosylases [Neisseria meningitidis] |
5O29_A | 1.39e-11 | 44 | 157 | 438 | 569 | Lytictransglycosylase in action [Neisseria meningitidis] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
O31608 | 4.84e-27 | 50 | 160 | 68 | 179 | Putative murein lytic transglycosylase YjbJ OS=Bacillus subtilis (strain 168) OX=224308 GN=yjbJ PE=3 SV=1 |
O64046 | 2.31e-24 | 50 | 186 | 1430 | 1572 | Probable tape measure protein OS=Bacillus phage SPbeta OX=66797 GN=yomI PE=3 SV=1 |
O31976 | 2.31e-24 | 50 | 186 | 1430 | 1572 | SPbeta prophage-derived uncharacterized transglycosylase YomI OS=Bacillus subtilis (strain 168) OX=224308 GN=yomI PE=3 SV=2 |
P27380 | 7.02e-08 | 43 | 133 | 8 | 98 | Transglycosylase OS=Enterobacteria phage PRD1 OX=10658 GN=VII PE=1 SV=3 |
A8ZWR8 | 3.44e-07 | 50 | 143 | 294 | 394 | Membrane-bound lytic murein transglycosylase F OS=Desulfococcus oleovorans (strain DSM 6200 / JCM 39069 / Hxd3) OX=96561 GN=mltF PE=3 SV=2 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.000801 | 0.998152 | 0.000450 | 0.000191 | 0.000192 | 0.000191 |
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