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CAZyme Information: MGYG000001466_00120

You are here: Home > Sequence: MGYG000001466_00120

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Providencia alcalifaciens
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Providencia; Providencia alcalifaciens
CAZyme ID MGYG000001466_00120
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
151 17089.03 8.8564
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001466 4044196 Isolate not provided not provided
Gene Location Start: 3423;  End: 3878  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001466_00120.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH23 28 144 1.3e-21 0.8518518518518519

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15328 PRK15328 2.15e-75 4 141 7 144
type III secretion system invasion protein IagB.
cd13400 LT_IagB-like 2.70e-53 26 138 1 109
Escherichia coli invasion protein IagB and similar proteins. Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.
pfam01464 SLT 8.16e-31 19 133 1 112
Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.
PRK13722 PRK13722 4.49e-24 5 145 8 151
lytic transglycosylase; Provisional
COG0741 MltE 9.56e-14 15 126 139 250
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AAQ60311.1 1.00e-60 16 139 18 141
QIY81203.1 1.00e-60 16 139 18 141
ATP32947.1 2.86e-60 16 139 18 141
ATP29038.1 2.86e-60 16 139 18 141
SQH92580.1 3.13e-59 13 141 16 144

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4XP8_A 9.08e-14 17 101 2 87
Structureof EtgA D60N mutant [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P43018 1.19e-57 15 141 18 144
Invasion protein IagB OS=Salmonella typhi OX=90370 GN=iagB PE=3 SV=1
P0CL15 1.69e-57 15 140 18 143
Invasion protein IagB OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=iagB PE=3 SV=1
E1WAC2 1.69e-57 15 140 18 143
Invasion protein IagB OS=Salmonella typhimurium (strain SL1344) OX=216597 GN=iagB PE=3 SV=1
Q55287 3.08e-39 5 142 7 144
Protein IpgF OS=Shigella sonnei OX=624 GN=ipgF PE=3 SV=1
Q07568 7.10e-38 16 142 18 144
Protein IpgF OS=Shigella flexneri OX=623 GN=ipgF PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.042875 0.850918 0.105042 0.000375 0.000342 0.000425

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001466_00120.