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CAZyme Information: MGYG000001482_00869
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Planococcus massiliensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Bacillales_A; Planococcaceae; Planococcus; Planococcus massiliensis | |||||||||||
| CAZyme ID | MGYG000001482_00869 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 847833; End: 848744 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00877 | NLPC_P60 | 1.09e-34 | 196 | 298 | 2 | 105 | NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins. |
| PRK13914 | PRK13914 | 7.35e-34 | 25 | 299 | 199 | 481 | invasion associated endopeptidase. |
| PRK06347 | PRK06347 | 2.14e-27 | 19 | 145 | 473 | 591 | 1,4-beta-N-acetylmuramoylhydrolase. |
| PRK06347 | PRK06347 | 1.08e-25 | 23 | 148 | 328 | 452 | 1,4-beta-N-acetylmuramoylhydrolase. |
| COG0791 | Spr | 6.93e-25 | 179 | 297 | 71 | 197 | Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QAS58661.1 | 1.71e-74 | 16 | 303 | 18 | 297 |
| AJK89391.1 | 6.87e-74 | 16 | 303 | 18 | 297 |
| QEA00679.1 | 6.87e-74 | 16 | 303 | 18 | 297 |
| QIC48446.1 | 1.14e-72 | 16 | 303 | 18 | 298 |
| QPA59365.1 | 1.14e-72 | 16 | 303 | 18 | 298 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4XCM_A | 2.93e-16 | 103 | 301 | 4 | 232 | Crystalstructure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4XCM_B Crystal structure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8] |
| 7CFL_A | 1.56e-13 | 187 | 299 | 18 | 137 | ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile] |
| 6B8C_A | 1.98e-09 | 184 | 281 | 29 | 126 | Crystalstructure of NlpC/p60 domain of peptidoglycan hydrolase SagA [Enterococcus faecium] |
| 3NPF_A | 8.28e-09 | 187 | 274 | 160 | 256 | Crystalstructure of a putative dipeptidyl-peptidase VI (BACOVA_00612) from Bacteroides ovatus at 1.72 A resolution [Bacteroides ovatus ATCC 8483],3NPF_B Crystal structure of a putative dipeptidyl-peptidase VI (BACOVA_00612) from Bacteroides ovatus at 1.72 A resolution [Bacteroides ovatus ATCC 8483] |
| 3PVQ_A | 2.02e-08 | 187 | 274 | 160 | 256 | Crystalstructure of a putative dipeptidyl-peptidase VI (BT_1314) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],3PVQ_B Crystal structure of a putative dipeptidyl-peptidase VI (BT_1314) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 2.10 A resolution [Bacteroides thetaiotaomicron VPI-5482],4R0K_A Crystal structure of a putative dipeptidyl-peptidase VI (BT_1314) from Bacteroides thetaiotaomicron VPI-5482 at 1.75 A resolution [Bacteroides thetaiotaomicron VPI-5482],4R0K_B Crystal structure of a putative dipeptidyl-peptidase VI (BT_1314) from Bacteroides thetaiotaomicron VPI-5482 at 1.75 A resolution [Bacteroides thetaiotaomicron VPI-5482] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O31852 | 4.64e-49 | 26 | 295 | 157 | 409 | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1 |
| P54421 | 1.18e-47 | 27 | 298 | 87 | 333 | Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1 |
| O07532 | 1.76e-40 | 27 | 298 | 175 | 486 | Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2 |
| Q01835 | 5.49e-29 | 25 | 299 | 174 | 511 | Probable endopeptidase p60 OS=Listeria grayi OX=1641 GN=iap PE=3 SV=1 |
| Q01837 | 1.71e-26 | 25 | 299 | 195 | 524 | Probable endopeptidase p60 OS=Listeria ivanovii OX=1638 GN=iap PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000222 | 0.999064 | 0.000180 | 0.000194 | 0.000171 | 0.000152 |