Species | Pseudomonas_E massiliensis | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_E; Pseudomonas_E massiliensis | |||||||||||
CAZyme ID | MGYG000001485_01748 | |||||||||||
CAZy Family | GT104 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 581669; End: 582799 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GT104 | 4 | 374 | 6.3e-132 | 0.9709762532981531 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
TIGR03837 | EarP | 0.0 | 5 | 373 | 1 | 371 | Elongation-Factor P (EF-P) rhamnosyltransferase EarP. This model describes a conserved protein that typically is encoded next to the gene efp for translation elongation factor P. |
pfam10093 | DUF2331 | 0.0 | 5 | 373 | 1 | 373 | Uncharacterized protein conserved in bacteria (DUF2331). Members of this family of hypothetical bacterial proteins have no known function. |
COG4394 | EarP | 4.92e-135 | 5 | 374 | 4 | 367 | Elongation-Factor P (EF-P) rhamnosyltransferase EarP [Translation, ribosomal structure and biogenesis]. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QVL17566.1 | 7.20e-174 | 1 | 376 | 1 | 377 |
QXI44720.1 | 4.00e-173 | 1 | 374 | 1 | 374 |
QWU81864.1 | 1.68e-172 | 1 | 376 | 1 | 377 |
KDN98210.1 | 3.39e-172 | 1 | 376 | 1 | 377 |
QPG63067.1 | 3.79e-171 | 1 | 376 | 1 | 376 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
5NV8_A | 5.30e-159 | 5 | 376 | 18 | 390 | Structuralbasis for EarP-mediated arginine glycosylation of translation elongation factor EF-P [Pseudomonas putida KT2440] |
6J7M_A | 1.62e-149 | 5 | 371 | 23 | 390 | Complexstructure of the Pseudomonas aeruginosa rhamnosyltransferase EarP with the acceptor elongation factor EF-P [Pseudomonas aeruginosa PAO1],6J7M_C Complex structure of the Pseudomonas aeruginosa rhamnosyltransferase EarP with the acceptor elongation factor EF-P [Pseudomonas aeruginosa PAO1] |
6J7L_A | 2.13e-149 | 5 | 371 | 23 | 390 | Crystalstructure of Pseudomonas aeruginosa Earp in complex with TDP [Pseudomonas aeruginosa PAO1] |
6J7J_A | 1.73e-148 | 5 | 371 | 23 | 390 | Crystalstructure of Pseudomonas aeruginosa Earp [Pseudomonas aeruginosa PAO1],6J7K_A Crystal structure of Pseudomonas aeruginosa Earp in complex with TDP-Rha [Pseudomonas aeruginosa PAO1] |
5WXI_A | 7.85e-56 | 7 | 371 | 10 | 374 | EarPbound with dTDP-rhamnose (soaked) [Neisseria meningitidis H44/76],5WXI_B EarP bound with dTDP-rhamnose (soaked) [Neisseria meningitidis H44/76],5WXJ_A Apo EarP [Neisseria meningitidis H44/76],5WXJ_B Apo EarP [Neisseria meningitidis H44/76],5WXK_A EarP bound with domain I of EF-P [Neisseria meningitidis H44/76] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q88LS1 | 6.45e-159 | 1 | 376 | 1 | 377 | Protein-arginine rhamnosyltransferase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=earP PE=1 SV=1 |
Q9HZZ1 | 4.61e-149 | 5 | 371 | 4 | 371 | Protein-arginine rhamnosyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=earP PE=1 SV=1 |
Q8EEP8 | 1.04e-98 | 2 | 375 | 7 | 395 | Protein-arginine rhamnosyltransferase OS=Shewanella oneidensis (strain MR-1) OX=211586 GN=earP PE=1 SV=1 |
E6MVV9 | 4.30e-55 | 7 | 371 | 10 | 374 | Protein-arginine rhamnosyltransferase OS=Neisseria meningitidis serogroup B / serotype 15 (strain H44/76) OX=909420 GN=earP PE=1 SV=1 |
A0A0T7AQA7 | 9.11e-54 | 7 | 371 | 10 | 374 | Protein-arginine rhamnosyltransferase OS=Neisseria meningitidis OX=487 GN=earP PE=1 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000069 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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