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CAZyme Information: MGYG000001503_02067

You are here: Home > Sequence: MGYG000001503_02067

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fermentimonas caenicola
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Dysgonomonadaceae; Fermentimonas; Fermentimonas caenicola
CAZyme ID MGYG000001503_02067
CAZy Family GH19
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
196 22753.2 9.7294
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001503 2824716 Isolate not provided not provided
Gene Location Start: 1272596;  End: 1273186  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001503_02067.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH19 41 133 1e-15 0.4025974025974026

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00325 chitinase_GH19 8.60e-07 48 135 52 149
Glycoside hydrolase family 19, chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Glycoside hydrolase family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases, but they are smaller in size due to certain deletions. Despite lacking any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the prokaryotic/eukaryotic divergence.
COG3179 COG3179 1.24e-04 45 173 42 185
Predicted chitinase [General function prediction only].
pfam00182 Glyco_hydro_19 1.28e-04 88 130 103 146
Chitinase class I.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CEA17011.1 1.94e-137 1 195 1 195
CEA15296.1 1.13e-98 2 191 5 194
QRX64201.1 9.31e-88 1 194 2 195
QRX62884.1 3.51e-80 1 192 1 192
QRX62908.1 1.65e-78 1 192 1 192

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2CJL_A 1.12e-07 14 123 11 122
CrystalStructure And Enzymatic Properties Of A Bacterial Family 19 Chitinase Reveal Differences With Plant Enzymes [Streptomyces coelicolor],2CJL_B Crystal Structure And Enzymatic Properties Of A Bacterial Family 19 Chitinase Reveal Differences With Plant Enzymes [Streptomyces coelicolor]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O22841 1.85e-06 33 130 127 219
Endochitinase At2g43620 OS=Arabidopsis thaliana OX=3702 GN=At2g43620 PE=3 SV=1
O22842 3.37e-06 46 123 139 209
Endochitinase At2g43610 OS=Arabidopsis thaliana OX=3702 GN=At2g43610 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000058 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001503_02067.