dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000001512_00084

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Species

Coprobacter secundus

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Coprobacteraceae; Coprobacter; Coprobacter secundus

CAZyme ID

MGYG000001512_00084

CAZy Family

GH115

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
840	MGYG000001512_14\|CGC1	96953.79	6.5159

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001512	4253015	Isolate	not provided	not provided

Gene Location

Start: 36434; End: 38956 Strand: -

EC	3.2.1.-

Family	Start	End	Evalue	family coverage
GH115	40	824	6e-225	0.9913916786226685

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam15979	Glyco_hydro_115	4.05e-173	189	531	3	334	Glycosyl hydrolase family 115. Glyco_hydro_115 is a family of glycoside hydrolases likely to have the activity of xylan a-1,2-glucuronidase, EC:3.2.1.131, or a-(4-O-methyl)-glucuronidase EC:3.2.1.-.
pfam17829	GH115_C	1.09e-06	710	838	40	170	Gylcosyl hydrolase family 115 C-terminal domain. This domain is found at the C-terminus of glycosyl hydrolase family 115 proteins. This domain has a beta-sandwich fold.
pfam03648	Glyco_hydro_67N	2.20e-04	93	155	64	120	Glycosyl hydrolase family 67 N-terminus. Alpha-glucuronidases, components of an ensemble of enzymes central to the recycling of photosynthetic biomass, remove the alpha-1,2 linked 4-O-methyl glucuronic acid from xylans. This family represents the N-terminal region of alpha-glucuronidase. The N-terminal domain forms a two-layer sandwich, each layer being formed by a beta sheet of five strands. A further two helices form part of the interface with the central, catalytic, module (pfam07488).
COG3661	AguA2	0.003	123	229	94	174	Alpha-glucuronidase [Carbohydrate transport and metabolism].

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCI62564.1	2.74e-236	19	839	6	938
EEB22994.1	9.19e-235	20	840	6	851
QJR76640.1	9.19e-235	20	840	6	851
QQA08841.1	1.01e-228	55	826	41	779
AIM39021.1	3.15e-228	21	826	7	783

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5BY3_A	2.09e-215	55	824	35	771	Anovel family GH115 4-O-Methyl-alpha-glucuronidase, BtGH115A, with specificity for decorated arabinogalactans [Bacteroides thetaiotaomicron VPI-5482]
4ZMH_A	4.30e-101	32	695	8	644	Crystalstructure of a five-domain GH115 alpha-Glucuronidase from the Marine Bacterium Saccharophagus degradans 2-40T [Saccharophagus degradans 2-40],4ZMH_B Crystal structure of a five-domain GH115 alpha-Glucuronidase from the Marine Bacterium Saccharophagus degradans 2-40T [Saccharophagus degradans 2-40]
7PXQ_A	1.67e-96	38	829	16	821	ChainA, xylan alpha-1,2-glucuronidase [uncultured bacterium]
7PUG_A	6.37e-96	38	829	17	822	ChainA, xylan alpha-1,2-glucuronidase [uncultured bacterium]
4C90_A	8.43e-95	68	837	73	845	Evidencethat GH115 alpha-glucuronidase activity is dependent on conformational flexibility [Bacteroides ovatus],4C90_B Evidence that GH115 alpha-glucuronidase activity is dependent on conformational flexibility [Bacteroides ovatus],4C91_A Evidence that GH115 alpha-glucuronidase activity is dependent on conformational flexibility [Bacteroides ovatus],4C91_B Evidence that GH115 alpha-glucuronidase activity is dependent on conformational flexibility [Bacteroides ovatus]

has no Swissprot hit.

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.010871	0.988239	0.000308	0.000190	0.000177	0.000190

There is no transmembrane helices in MGYG000001512_00084.