Species | Gorillibacterium timonense | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Gorillibacterium; Gorillibacterium timonense | |||||||||||
CAZyme ID | MGYG000001518_02802 | |||||||||||
CAZy Family | CBM32 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 248984; End: 256609 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
CBM32 | 581 | 694 | 2.6e-30 | 0.9274193548387096 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
pfam00754 | F5_F8_type_C | 5.23e-26 | 580 | 692 | 3 | 125 | F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. |
NF033190 | inl_like_NEAT_1 | 8.37e-19 | 2339 | 2530 | 559 | 748 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
cd00057 | FA58C | 4.51e-16 | 580 | 697 | 15 | 143 | Substituted updates: Jan 31, 2002 |
NF033190 | inl_like_NEAT_1 | 1.07e-13 | 2314 | 2473 | 573 | 753 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
NF033190 | inl_like_NEAT_1 | 7.06e-11 | 2420 | 2535 | 580 | 692 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QMV41393.1 | 3.54e-202 | 1877 | 2535 | 1580 | 2235 |
QFU97473.1 | 8.62e-133 | 7 | 700 | 10 | 839 |
QNK59241.1 | 1.34e-65 | 2211 | 2535 | 1134 | 1459 |
BBI31951.1 | 1.74e-61 | 2209 | 2538 | 1212 | 1535 |
QAV19712.1 | 2.91e-61 | 2220 | 2532 | 1207 | 1514 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
2RV9_A | 2.29e-38 | 574 | 697 | 7 | 136 | Solutionstructure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis] |
4ZXE_A | 2.37e-38 | 574 | 697 | 8 | 137 | X-raycrystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5. [Paenibacillus fukuinensis],4ZXE_B X-ray crystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5. [Paenibacillus fukuinensis],4ZXE_C X-ray crystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5. [Paenibacillus fukuinensis] |
4ZY9_A | 4.40e-38 | 574 | 697 | 8 | 137 | X-raycrystal structure of selenomethionine-labelled V110M mutant of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis],4ZY9_B X-ray crystal structure of selenomethionine-labelled V110M mutant of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis] |
2RVA_A | 8.28e-31 | 574 | 697 | 7 | 137 | Solutionstructure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis] |
4ZZ5_A | 8.54e-31 | 574 | 697 | 8 | 138 | X-raycrystal structure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis],4ZZ5_B X-ray crystal structure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis],4ZZ8_A X-ray crystal structure of chitosan-binding module 2 in complex with chitotriose derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis],4ZZ8_B X-ray crystal structure of chitosan-binding module 2 in complex with chitotriose derived from chitosanase/glucanase from Paenibacillus sp. IK-5 [Paenibacillus fukuinensis] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P38536 | 8.91e-28 | 2265 | 2535 | 1593 | 1856 | Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2 |
P38535 | 1.06e-23 | 2361 | 2535 | 906 | 1082 | Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1 |
P19424 | 1.44e-18 | 2355 | 2534 | 33 | 214 | Endoglucanase OS=Bacillus sp. (strain KSM-635) OX=1415 PE=1 SV=1 |
C6CRV0 | 2.76e-17 | 2291 | 2533 | 1219 | 1458 | Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1 |
Q06853 | 1.41e-16 | 2361 | 2472 | 523 | 638 | Cell surface glycoprotein 2 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=Cthe_3079 PE=1 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.000295 | 0.999007 | 0.000182 | 0.000190 | 0.000157 | 0.000138 |
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