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CAZyme Information: MGYG000001523_00421
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Gracilibacillus massiliensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Bacillales_D; Amphibacillaceae; Gracilibacillus; Gracilibacillus massiliensis | |||||||||||
| CAZyme ID | MGYG000001523_00421 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | putative peptidoglycan endopeptidase LytE | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 241387; End: 242475 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM50 | 177 | 218 | 2e-16 | 0.95 |
| CBM50 | 102 | 143 | 6.6e-16 | 0.95 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK06347 | PRK06347 | 3.08e-36 | 26 | 238 | 328 | 543 | 1,4-beta-N-acetylmuramoylhydrolase. |
| pfam00877 | NLPC_P60 | 4.42e-34 | 257 | 360 | 1 | 105 | NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins. |
| PRK13914 | PRK13914 | 5.52e-34 | 1 | 360 | 1 | 480 | invasion associated endopeptidase. |
| PRK06347 | PRK06347 | 1.63e-32 | 28 | 218 | 405 | 591 | 1,4-beta-N-acetylmuramoylhydrolase. |
| COG0791 | Spr | 3.46e-29 | 223 | 355 | 53 | 193 | Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QGH32879.1 | 4.76e-150 | 1 | 362 | 1 | 360 |
| AXI11208.1 | 1.00e-131 | 7 | 362 | 1 | 347 |
| AVR00362.1 | 4.95e-128 | 1 | 362 | 1 | 361 |
| BAC14858.1 | 7.55e-127 | 1 | 362 | 1 | 359 |
| AIF44561.1 | 4.18e-126 | 1 | 362 | 1 | 358 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2K1G_A | 6.51e-14 | 246 | 360 | 7 | 122 | SolutionNMR structure of lipoprotein spr from Escherichia coli K12. Northeast Structural Genomics target ER541-37-162 [Escherichia coli K-12] |
| 4HPE_A | 4.09e-13 | 247 | 354 | 189 | 299 | ChainA, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_B Chain B, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_C Chain C, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_D Chain D, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_E Chain E, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_F Chain F, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630] |
| 7CFL_A | 3.04e-12 | 248 | 360 | 17 | 136 | ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile] |
| 2MKX_A | 2.51e-11 | 175 | 216 | 5 | 46 | Solutionstructure of LysM the peptidoglycan binding domain of autolysin AtlA from Enterococcus faecalis [Enterococcus faecalis V583] |
| 6B8C_A | 1.21e-10 | 244 | 343 | 27 | 126 | Crystalstructure of NlpC/p60 domain of peptidoglycan hydrolase SagA [Enterococcus faecium] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P54421 | 5.48e-64 | 4 | 361 | 2 | 334 | Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1 |
| O07532 | 1.11e-55 | 30 | 362 | 175 | 488 | Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2 |
| O31852 | 5.80e-51 | 23 | 355 | 82 | 407 | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1 |
| Q49UX4 | 4.63e-28 | 4 | 221 | 2 | 196 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=sle1 PE=3 SV=1 |
| Q6GJK9 | 5.07e-27 | 4 | 228 | 2 | 211 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=sle1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000264 | 0.999006 | 0.000176 | 0.000180 | 0.000177 | 0.000156 |