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CAZyme Information: MGYG000001535_01005
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Paenibacillus_A phocaensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_A; Paenibacillus_A phocaensis | |||||||||||
| CAZyme ID | MGYG000001535_01005 | |||||||||||
| CAZy Family | SLH | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 412830; End: 417737 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| SLH | 1462 | 1501 | 2.8e-16 | 0.9523809523809523 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| NF033190 | inl_like_NEAT_1 | 1.00e-14 | 1452 | 1629 | 572 | 748 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| NF033190 | inl_like_NEAT_1 | 8.80e-13 | 1460 | 1571 | 641 | 752 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| pfam00395 | SLH | 6.79e-12 | 1462 | 1501 | 1 | 41 | S-layer homology domain. |
| pfam00395 | SLH | 2.10e-10 | 1521 | 1563 | 1 | 42 | S-layer homology domain. |
| pfam00395 | SLH | 2.38e-10 | 1583 | 1625 | 1 | 42 | S-layer homology domain. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ALN14952.1 | 6.64e-182 | 47 | 1300 | 57 | 1136 |
| APZ09297.1 | 6.64e-182 | 47 | 1300 | 57 | 1136 |
| QCV93927.1 | 1.21e-179 | 47 | 1300 | 1 | 1080 |
| AOZ47007.1 | 1.32e-179 | 47 | 1300 | 57 | 1136 |
| AZP36897.1 | 1.32e-179 | 47 | 1300 | 57 | 1136 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4AQ1_A | 1.04e-10 | 1460 | 1631 | 2 | 166 | Structureof the SbsB S-layer protein of Geobacillus stearothermophilus PV72p2 in complex with nanobody KB6 [Geobacillus stearothermophilus] |
| 4AQ1_C | 1.04e-10 | 1460 | 1631 | 2 | 166 | Structureof the SbsB S-layer protein of Geobacillus stearothermophilus PV72p2 in complex with nanobody KB6 [Geobacillus stearothermophilus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| C6CRV0 | 7.15e-20 | 1457 | 1632 | 1278 | 1458 | Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1 |
| P38536 | 1.52e-18 | 1462 | 1632 | 1682 | 1854 | Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2 |
| P38535 | 1.59e-16 | 1462 | 1632 | 908 | 1080 | Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1 |
| P38537 | 2.48e-15 | 1469 | 1631 | 42 | 204 | Surface-layer 125 kDa protein OS=Lysinibacillus sphaericus OX=1421 PE=3 SV=1 |
| Q06848 | 1.23e-14 | 1454 | 1585 | 280 | 412 | Cellulosome-anchoring protein OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=ancA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000250 | 0.999022 | 0.000178 | 0.000203 | 0.000159 | 0.000137 |