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CAZyme Information: MGYG000001542_00434

You are here: Home > Sequence: MGYG000001542_00434

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paenibacillus_A sp900069005
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_A; Paenibacillus_A sp900069005
CAZyme ID MGYG000001542_00434
CAZy Family CE15
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2370 MGYG000001542_10|CGC3 257464.39 4.5302
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001542 5846629 Isolate not provided not provided
Gene Location Start: 88492;  End: 95604  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001542_00434.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 1331 1668 1.4e-94 0.9900990099009901
CE15 260 607 1.4e-61 0.9814126394052045

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00331 Glyco_hydro_10 1.33e-92 1331 1668 1 310
Glycosyl hydrolase family 10.
smart00633 Glyco_10 6.46e-86 1372 1666 1 263
Glycosyl hydrolase family 10.
COG3693 XynA 1.24e-72 1331 1668 26 339
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
cd00063 FN3 4.83e-14 1873 1961 1 93
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
NF033190 inl_like_NEAT_1 4.30e-12 2098 2368 474 754
NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABX44209.1 0.0 38 982 1283 2228
QAY65909.1 3.51e-201 1536 2370 1 825
AEV67023.1 1.07e-156 960 2366 165 1456
QHW33615.1 9.76e-147 1326 2365 351 1330
QAY65135.1 2.23e-146 239 976 44 830

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3RDK_A 1.45e-75 1331 1669 7 338
Proteincrystal structure of xylanase A1 of Paenibacillus sp. JDR-2 [Paenibacillus sp. JDR-2],3RDK_B Protein crystal structure of xylanase A1 of Paenibacillus sp. JDR-2 [Paenibacillus sp. JDR-2],3RO8_A Crystal structure of the catalytic domain of XynA1 from Paenibacillus sp. JDR-2 [Paenibacillus sp. JDR-2],3RO8_B Crystal structure of the catalytic domain of XynA1 from Paenibacillus sp. JDR-2 [Paenibacillus sp. JDR-2],3RO8_C Crystal structure of the catalytic domain of XynA1 from Paenibacillus sp. JDR-2 [Paenibacillus sp. JDR-2],3RO8_D Crystal structure of the catalytic domain of XynA1 from Paenibacillus sp. JDR-2 [Paenibacillus sp. JDR-2],3RO8_E Crystal structure of the catalytic domain of XynA1 from Paenibacillus sp. JDR-2 [Paenibacillus sp. JDR-2],3RO8_F Crystal structure of the catalytic domain of XynA1 from Paenibacillus sp. JDR-2 [Paenibacillus sp. JDR-2],3RO8_G Crystal structure of the catalytic domain of XynA1 from Paenibacillus sp. JDR-2 [Paenibacillus sp. JDR-2],3RO8_H Crystal structure of the catalytic domain of XynA1 from Paenibacillus sp. JDR-2 [Paenibacillus sp. JDR-2],4E4P_A Second native structure of Xylanase A1 from Paenibacillus sp. JDR-2 [Paenibacillus sp. JDR-2],4E4P_B Second native structure of Xylanase A1 from Paenibacillus sp. JDR-2 [Paenibacillus sp. JDR-2]
4HU8_A 7.33e-66 1311 1667 83 441
CrystalStructure of a Bacterial Ig-like Domain Containing GH10 Xylanase from Termite Gut [Globitermes brachycerastes],4HU8_B Crystal Structure of a Bacterial Ig-like Domain Containing GH10 Xylanase from Termite Gut [Globitermes brachycerastes],4HU8_C Crystal Structure of a Bacterial Ig-like Domain Containing GH10 Xylanase from Termite Gut [Globitermes brachycerastes],4HU8_D Crystal Structure of a Bacterial Ig-like Domain Containing GH10 Xylanase from Termite Gut [Globitermes brachycerastes],4HU8_E Crystal Structure of a Bacterial Ig-like Domain Containing GH10 Xylanase from Termite Gut [Globitermes brachycerastes],4HU8_F Crystal Structure of a Bacterial Ig-like Domain Containing GH10 Xylanase from Termite Gut [Globitermes brachycerastes],4HU8_G Crystal Structure of a Bacterial Ig-like Domain Containing GH10 Xylanase from Termite Gut [Globitermes brachycerastes],4HU8_H Crystal Structure of a Bacterial Ig-like Domain Containing GH10 Xylanase from Termite Gut [Globitermes brachycerastes]
6FHE_A 4.30e-58 1328 1667 10 339
Highlyactive enzymes by automated modular backbone assembly and sequence design [synthetic construct]
5OFJ_A 1.71e-56 1320 1668 2 337
Crystalstructure of N-terminal domain of bifunctional CbXyn10C [Caldicellulosiruptor bescii DSM 6725]
7NL2_A 3.35e-56 1328 1668 9 339
ChainA, Beta-xylanase [Pseudothermotoga thermarum DSM 5069],7NL2_B Chain B, Beta-xylanase [Pseudothermotoga thermarum DSM 5069]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
C6CRV0 5.33e-118 987 2363 189 1456
Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1
P38535 1.94e-72 1305 2369 178 1084
Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1
Q60037 1.05e-57 1006 1681 70 699
Endo-1,4-beta-xylanase A OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=xynA PE=1 SV=1
Q60042 7.36e-57 1006 1681 65 695
Endo-1,4-beta-xylanase A OS=Thermotoga neapolitana OX=2337 GN=xynA PE=1 SV=1
P36917 2.75e-55 970 2292 21 1155
Endo-1,4-beta-xylanase A OS=Thermoanaerobacterium saccharolyticum OX=28896 GN=xynA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000271 0.999036 0.000199 0.000171 0.000156 0.000138

TMHMM  Annotations      download full data without filtering help

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