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CAZyme Information: MGYG000001551_02030

You are here: Home > Sequence: MGYG000001551_02030

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Odoribacter massiliensis
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Marinifilaceae; Odoribacter; Odoribacter massiliensis
CAZyme ID MGYG000001551_02030
CAZy Family GH63
CAZyme Description Glucosidase YgjK
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
638 MGYG000001551_11|CGC13 73535.03 4.9404
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001551 4400991 Isolate not provided not provided
Gene Location Start: 2004560;  End: 2006476  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001551_02030.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH63 213 635 1.6e-104 0.5263157894736842

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10137 PRK10137 8.57e-137 10 638 12 786
alpha-glucosidase; Provisional
COG3408 GDB1 1.65e-20 320 632 302 603
Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].
pfam01204 Trehalase 4.77e-11 356 586 178 450
Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi.
PLN02567 PLN02567 8.80e-08 320 529 171 432
alpha,alpha-trehalase
COG1626 TreA 3.17e-04 356 632 222 552
Neutral trehalase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQY39153.1 4.35e-253 30 637 36 644
ABR39053.1 4.35e-253 30 637 36 644
QUT89313.1 4.67e-252 17 637 21 642
ALK84236.1 5.01e-252 30 637 36 644
QEW38502.1 5.01e-252 30 637 36 644

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3W7S_A 9.14e-86 51 638 32 759
Escherichiacoli K12 YgjK complexed with glucose [Escherichia coli K-12],3W7S_B Escherichia coli K12 YgjK complexed with glucose [Escherichia coli K-12],3W7T_A Escherichia coli K12 YgjK complexed with mannose [Escherichia coli K-12],3W7T_B Escherichia coli K12 YgjK complexed with mannose [Escherichia coli K-12],3W7U_A Escherichia coli K12 YgjK complexed with galactose [Escherichia coli K-12],3W7U_B Escherichia coli K12 YgjK complexed with galactose [Escherichia coli K-12]
3W7X_A 4.81e-85 51 638 32 759
Crystalstructure of E. coli YgjK D324N complexed with melibiose [Escherichia coli K-12],3W7X_B Crystal structure of E. coli YgjK D324N complexed with melibiose [Escherichia coli K-12],5CA3_A Crystal structure of the glycosynthase mutant D324N of Escherichia coli GH63 glycosidase in complex with glucose and lactose [Escherichia coli K-12],5CA3_B Crystal structure of the glycosynthase mutant D324N of Escherichia coli GH63 glycosidase in complex with glucose and lactose [Escherichia coli K-12]
3W7W_A 6.70e-85 51 638 32 759
Crystalstructure of E. coli YgjK E727A complexed with 2-O-alpha-D-glucopyranosyl-alpha-D-galactopyranose [Escherichia coli K-12],3W7W_B Crystal structure of E. coli YgjK E727A complexed with 2-O-alpha-D-glucopyranosyl-alpha-D-galactopyranose [Escherichia coli K-12],5GW7_A Crystal structure of the glycosynthase mutant E727A of Escherichia coli GH63 glycosidase in complex with glucose and lactose [Escherichia coli K-12],5GW7_B Crystal structure of the glycosynthase mutant E727A of Escherichia coli GH63 glycosidase in complex with glucose and lactose [Escherichia coli K-12]
3D3I_A 1.01e-80 51 638 33 760
Crystalstructural of Escherichia coli K12 YgjK, a glucosidase belonging to glycoside hydrolase family 63 [Escherichia coli K-12],3D3I_B Crystal structural of Escherichia coli K12 YgjK, a glucosidase belonging to glycoside hydrolase family 63 [Escherichia coli K-12]
6XUX_A 2.58e-39 51 421 358 779
ChainA, Nanobody,Glucosidase YgjK,Glucosidase YgjK,Nanobody [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P42592 7.88e-85 51 638 55 782
Glucosidase YgjK OS=Escherichia coli (strain K12) OX=83333 GN=ygjK PE=1 SV=1
D8QTR2 2.80e-14 296 626 90 479
Mannosylglycerate hydrolase MGH1 OS=Selaginella moellendorffii OX=88036 GN=MGH PE=1 SV=1
D8T3S4 6.53e-14 296 626 90 479
Mannosylglycerate hydrolase MGH2 OS=Selaginella moellendorffii OX=88036 GN=SELMODRAFT_447962 PE=3 SV=1
P94250 6.69e-10 359 588 115 328
Uncharacterized protein BB_0381 OS=Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31) OX=224326 GN=BB_0381 PE=4 SV=2

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000126 0.040196 0.959606 0.000028 0.000045 0.000027

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001551_02030.